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scnpilot_p_inoc_scaffold_905_10

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 11595..12491

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAS6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 296.0
  • Bit_score: 354
  • Evalue 1.00e-94
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31796.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 293.0
  • Bit_score: 355
  • Evalue 6.50e-95
periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 296.0
  • Bit_score: 354
  • Evalue 2.90e-95

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCACGCCCTGCCCCCCTCGCGGCGCGCGGTGCTGGCCGCGGCCCTGGGCTGCGCCACGCCGCTGGCGCTGCGGGCACAGCCAGCGCCCGCCGCGTCTGCCACATCCGCCGCAGCGGGCCTGCCGCGCCTGGTGACCGTCAGCGGCGCCATCACCGAGGTGGTCTATGCGCTGGGCGCCGAGGCCCAGCTCGCGGGCACCGACACCACCAGCCTGTACCCCGCCGCCGCGCTGAAGACGCCCAAGGTGGGCTACCTGCGCCAGCTCTCGGCCGAGGGCGTGCTCTCGCTGCGGCCCGACGCGGTGATTGCCACCACCGAGGCCGGCCCGCCCGTGGTGCTCGACCAGTTGCGCAGCGCCGGCGTGAAGGTGGAGCTGGTTCCGTCCGAATACACCTGGGACGACGTGCGCCGCAAGGTGCAGGCCGTGGGCCACGCGGCCCGGCGCGAGGACGCCGCGCGGGCGCTGCAGGCGCGGCTCGACGCCGAATGGGCGCAGCTCGGCCGCGAGGTCGCGCAGGCCGCCGCCGGGCGCGCGGCGCCGCGCGTGCTGTTCGTGCTGTCCCACGGGCCCTCGGCCCAGGTGGGCGGCCAGGGCACGGCGGGCGATGCGCTGATCCGCTTCGCCGGCGGGGTGAACGCGCTCACGGGCTTCACCGGCTACCGGCCCATGACGGCCGAGGCCCTGGCCAGCAGCGCGCCGGACTTCATCCTCACCACCGAGCAGGGCATCGATGCCCTGGGCGGGCCGCAGAAGTTCTGGCAGCGGCCCGAGCTCGCCCTGACCCCGGCCTACCAGCGCCGCGCGCTGATCGCGCTCGACGCGCTGCTGCTGATGGGCTTCGGCCCGCGCCTGCCCCAGGCCGTGCGCGCCCTGCACGCCAGCCTGTACCCATGA
PROTEIN sequence
Length: 299
MHALPPSRRAVLAAALGCATPLALRAQPAPAASATSAAAGLPRLVTVSGAITEVVYALGAEAQLAGTDTTSLYPAAALKTPKVGYLRQLSAEGVLSLRPDAVIATTEAGPPVVLDQLRSAGVKVELVPSEYTWDDVRRKVQAVGHAARREDAARALQARLDAEWAQLGREVAQAAAGRAAPRVLFVLSHGPSAQVGGQGTAGDALIRFAGGVNALTGFTGYRPMTAEALASSAPDFILTTEQGIDALGGPQKFWQRPELALTPAYQRRALIALDALLLMGFGPRLPQAVRALHASLYP*