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scnpilot_p_inoc_scaffold_1077_27

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(29588..30097)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036628F8 similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 321
  • Evalue 5.50e-85
  • rbh
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:GAD23455.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 321
  • Evalue 7.70e-85
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 167.0
  • Bit_score: 307
  • Evalue 1.80e-81

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGTCCTCCGCCCACAGCCCCCTCCACCGCGAAATCGCCACCCTCTACACCGACCACCACGGCTGGCTGCAGGGCTGGCTGCGCAAGAAGCTCGGCGACGTGCACCAGGCGGCCGACCTGGCGCACGACACCTTCGTGCGCCTGCTGGCGCGCGAGGAGCCCGTGCAGGCGCGCGAGCCGCGCGCCTTCCTGACCACGGTGGCGCAGCGCGTGGTGGCCAACCACTACCGGCGCCAGCAGCTGGAGCGCGCCTACCTGGAAGCGCTGGCCCAGGCGCCGCAGGCCGCCGCGCTGTCGCCCGAGGAGCGCGCGCTGCTGCTGGAGGCGCTGGACGAAATCGACCGCCTGCTCGACGGCCTGCCCGCGCCCGTGCGGCGCGCGTTCCTGATGGCCCAGCTCGACGGCATGAAGCAGGCCGACATCGCCCGCGCGCTCGGCGTGTCGCTCACCACCGTCAAGCGCTACCTGGTGCAGGCGGGCATGCGCTGCTACTTCGCGGTGGCGCCGTGA
PROTEIN sequence
Length: 170
MSSAHSPLHREIATLYTDHHGWLQGWLRKKLGDVHQAADLAHDTFVRLLAREEPVQAREPRAFLTTVAQRVVANHYRRQQLERAYLEALAQAPQAAALSPEERALLLEALDEIDRLLDGLPAPVRRAFLMAQLDGMKQADIARALGVSLTTVKRYLVQAGMRCYFAVAP*