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scnpilot_p_inoc_scaffold_1077_33

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(37763..38269)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D2G8_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 168.0
  • Bit_score: 276
  • Evalue 2.00e-71
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EFI62675.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 168.0
  • Bit_score: 276
  • Evalue 2.80e-71
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 168.0
  • Bit_score: 268
  • Evalue 1.60e-69

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGCCCGCCGCCGAAACCGTTCACCAGCGCGAAGTCGCCGCGCTCTATGCCGACCACCATGGCTGGCTGCTCGGATGGCTGCAGCGCCGGCTCGGCCATGCCGGCGATGCAGCCGACCTGGCGCAGGACACCTTCGTGCGCATCCTGGGCGCGCGCGATCCGCAGGCCATCGCCGTTCCGCGCGCCTACCTGACCACGGTGGCCAAGGGCGTGCTGGTCAACTGGTGCCGGCGCCAGGCGCTGGAGCGCGCCTACCTGGAGGCGCTGGCCCTGCTGCCCGCGCCCGAGGCGCCGTCGCCCGAGCAGCGCGCCGTGGTGCTGGAGACCCTGCACGAGATCGACGCCATGCTCGACGCGCTGCCGCCGCTGGCGCGGCGTGCCTTTTTGCTCTCGCAACTGGATGGCATGAAGTACGAGGACATCGCCCGGCAGCTCGGCGTGTCGCTCGCCAGCGTCAAGCGCTACATGGCCCAGGCCTTCCGCCAGTGCCTGGCGCTGATGGACTGA
PROTEIN sequence
Length: 169
MPAAETVHQREVAALYADHHGWLLGWLQRRLGHAGDAADLAQDTFVRILGARDPQAIAVPRAYLTTVAKGVLVNWCRRQALERAYLEALALLPAPEAPSPEQRAVVLETLHEIDAMLDALPPLARRAFLLSQLDGMKYEDIARQLGVSLASVKRYMAQAFRQCLALMD*