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scnpilot_p_inoc_scaffold_1077_36

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(41932..42441)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Acidovorax sp. CF316 RepID=J0U1Q6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 160.0
  • Bit_score: 212
  • Evalue 2.80e-52
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJE50082.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 160.0
  • Bit_score: 212
  • Evalue 3.90e-52
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 160.0
  • Bit_score: 201
  • Evalue 1.40e-49

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCACGCCCCGCCCAGCACCGCCGCCCATCCCGTGCACGCCCTGTACCGGGAGCACCACGGCTGGCTGCTGGCCCTGCTGCACCGCCGCCTGCGCTGCCCGGACGGCGCGGCCGACCTGGCGCACGACACCTTCGTGCGCGTGCTGCTCAAGCCCGAGGTGCTGCCCGGGCTGCGCGCGCCGCGCGCCTACCTCGCCACCATCGCGCGCGGCCTGCTGCACGACCACTGGCGCCGCCGCTCGCTGGAGCAGGCCTGGCTCGACACCCTCGCCGCGCTGCCCGAGGCGCACGCCCCCGCGCCCGAGGACGCGCTCGCCATCCGCCAGGCGCTGCAGCAGCTCGACGACCTGCTCGGCCGCCTGGCGCCCAAGGCGCGCGAGGTGTTCGTGCTCTCGCAACTGCAGGGCCTGGGCTACGCGCAGATCGCGGCCCAGGTGGGCGTGAGCGAGCGCACCGTCAAGCGCTACATGGCGCAGGGGTTCGAGCTGTGCCTCACGCTGATGGAATGA
PROTEIN sequence
Length: 170
MHAPPSTAAHPVHALYREHHGWLLALLHRRLRCPDGAADLAHDTFVRVLLKPEVLPGLRAPRAYLATIARGLLHDHWRRRSLEQAWLDTLAALPEAHAPAPEDALAIRQALQQLDDLLGRLAPKAREVFVLSQLQGLGYAQIAAQVGVSERTVKRYMAQGFELCLTLME*