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scnpilot_p_inoc_scaffold_1118_13

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(13487..14014)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D563B similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 175.0
  • Bit_score: 311
  • Evalue 7.70e-82
  • rbh
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:GAD24396.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 175.0
  • Bit_score: 311
  • Evalue 1.10e-81
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 170.0
  • Bit_score: 202
  • Evalue 1.10e-49

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGCCTGCCGCCCAGAGCGTTCACGACCGCGCGATTGCCGCTCTCTACTCCGACCACCACGGCTGGCTGCTGGGCTGGCTGCGCCGCCGCCTGGGCAACGGCTGGGACGCGGCCGACCTGGCGCAGGACACCTTCGTGCGCCTGCTCGTGGCGCCCGAGGGCACGCCCGAGAAACAGCGCGCCTGGCAGCTCGACGAACCCCGGGCCTACCTCACCCTCATCGCCAAGCGCCTGCTGGCCAACCTGCACCGCCGCCGCGCGCTGGAGCAGGCCTACCTGGAGACGCTGGCCCAGTTGCCCGCGCCGCTGGCCCCCGCGCCCGAGCAGCGCGCCCTGCTGCTGGAGGCGCTGCAGCAGATCGACGCCGCGCTCGACGGCCTGCCCGCGCCCGTGCGCACGGCCTTCCTGCTGGCGCAGCTCGAAGGCCTGGGCCAGGCCGCCATCGCCGCGCGCCTGTCTGTCAGCGAGCGCACCGTCAAGCGCTACATGGTCCAGGCCATGGCCCGCTGCATCGTCCACCTGCCATGA
PROTEIN sequence
Length: 176
MPAAQSVHDRAIAALYSDHHGWLLGWLRRRLGNGWDAADLAQDTFVRLLVAPEGTPEKQRAWQLDEPRAYLTLIAKRLLANLHRRRALEQAYLETLAQLPAPLAPAPEQRALLLEALQQIDAALDGLPAPVRTAFLLAQLEGLGQAAIAARLSVSERTVKRYMVQAMARCIVHLP*