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scnpilot_p_inoc_scaffold_1118_16

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(16185..16373)

Top 3 Functional Annotations

Value Algorithm Source
CsbD family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYP1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 59.0
  • Bit_score: 76
  • Evalue 8.80e-12
Variovorax paradoxus strain MEDvA23 contig_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31571.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 59.0
  • Bit_score: 77
  • Evalue 9.30e-12
csbd family protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 59.0
  • Bit_score: 76
  • Evalue 2.40e-12

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGAACAAGCATCAAGTGACCGGCCGCGTCGAAGAAGCCAAGGGCGCCGTCAAGGAAGTGGTGGGCAAGGTGGTTGGCAACCCGAAGCTGGAGGCCGAAGGCATCGTCCAGAAGAACGCCGGCAAGGTCGAGGCCAAGGCCGGCGACCTGGCCGCCAAGGTCGAGGACGCGGTCAAGCGCTCCAAGTAA
PROTEIN sequence
Length: 63
MNKHQVTGRVEEAKGAVKEVVGKVVGNPKLEAEGIVQKNAGKVEAKAGDLAAKVEDAVKRSK*