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scnpilot_p_inoc_scaffold_1046_18

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 11261..11587

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Burkholderia terrae BS001 RepID=I5CVI8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 100.0
  • Bit_score: 144
  • Evalue 4.50e-32
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EUC16370.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 100.0
  • Bit_score: 146
  • Evalue 2.80e-32
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 100.0
  • Bit_score: 141
  • Evalue 1.40e-31

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Taxonomy

Burkholderia sp. BT03 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
GTGGCCACGCGCGTGCTGGCCAACCACTGGCGCCGCGAACAGCTGGAGCGTGCCTACCTGGAGACACTGCGCCACCTGCCGCAGGCGCTGGCGCCTTCCCCCGAGGAGCGCGCCCTGCTGCTGGAGGCGCTGTGCGAGATCGACGCGCTGCTCGACGGCCTGCCGGTGCCCGCCAAGCGCGCCTTCCTCTTCAGCCAGCTCGACGGGCTCACGCAGGCGCAGATTGCCGAGCGGCTCGGCGTGACCGAGCGCACCGTGCGCCGCTACCTCACCCAGGCCGCCGAAACCTGCTTCTTCGCGGACGTGCTGGGCCGCGCGCGGGCATGA
PROTEIN sequence
Length: 109
VATRVLANHWRREQLERAYLETLRHLPQALAPSPEERALLLEALCEIDALLDGLPVPAKRAFLFSQLDGLTQAQIAERLGVTERTVRRYLTQAAETCFFADVLGRARA*