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scnpilot_p_inoc_scaffold_1708_5

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 3350..4273

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377531 similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 309.0
  • Bit_score: 340
  • Evalue 2.10e-90
  • rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJE49427.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 335.0
  • Bit_score: 332
  • Evalue 4.70e-88
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 301.0
  • Bit_score: 290
  • Evalue 5.30e-76

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCCCGCCTTGCCCTCTCCCATGCCTGCCGACGTTCCCCAGCCTCCCGCGGACCCGGCGCTGCGCGCGCACCTGGCGCGCCTGCGCGAGCTGCGGCCCGGTCTGTGGCTGCACTGCGACGACGCGCACGACCCCTGCGACCTGACGGCGCAGGCCGAGATCGGCGTGGGCCTGCGCATGGTGGTGCTGCTCGACGGGGCGCTGGACGTGTCCTACGGCACCGCGCGCGTGGCGCTGTCGCACCACCGCGCCGGCGCCAGCGCGGCGCTGGTGGCCGTGGCCGAGCCCGACCGCTTCACGCGCCGCACGCGCCAGGGCGTGTACTCGCGCCGCATCAGCCTGGGGCTGTGCGGCGACTGGCTGGCGCAGGCGGGCGGCGACATGGCGGCGCCCGAGCTGGGGCATTTCATGCGCCGCCACCTGGCCACGCGCCGCTGGCAGCTCTCGCCGCGCGCGGCGGCGCTGGCCGAGCAGATCGTGCGCCCGCCGCCGCTGGTGCCGCTGCTGCAGCACATGTACCTGGAAAGCCGCACGCTGGAGCTGGTGGGCGATGCCCTCGGCGCGCTGTGCCAGCATGCCGCGCCCGCCCCGGCGCTGCGCCCGCGCGAGCACCAGCGCCTGCGCGAGCTGCACGCCTTCCTGGCCTCAGGCCGGGCCGACGCGCTGTCGCTCGACGACATCGCGCGCCAGGCGGGCGTCAACGCCAACACCCTGCAGCGCCAGTTCCGCGCCGTCTATGGCACCACGGTGTTCGAGCACCTGCGCGAAGGCCGCCTGCAGCGCGCGCGCCAGGCGCTCGAGCGCGACGGCGTCACCGTCGGCCAGGCCGCGCTGGTGGCGGGCTACACCAGCGCCGCCAATTTCGCCACTGCGTACCGGCGGCGCTTCGGCACCCCGCCCAAGCTGGCGCGGGCGCGGGTGTAG
PROTEIN sequence
Length: 308
MPALPSPMPADVPQPPADPALRAHLARLRELRPGLWLHCDDAHDPCDLTAQAEIGVGLRMVVLLDGALDVSYGTARVALSHHRAGASAALVAVAEPDRFTRRTRQGVYSRRISLGLCGDWLAQAGGDMAAPELGHFMRRHLATRRWQLSPRAAALAEQIVRPPPLVPLLQHMYLESRTLELVGDALGALCQHAAPAPALRPREHQRLRELHAFLASGRADALSLDDIARQAGVNANTLQRQFRAVYGTTVFEHLREGRLQRARQALERDGVTVGQAALVAGYTSAANFATAYRRRFGTPPKLARARV*