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scnpilot_p_inoc_scaffold_1726_7

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6501..7166)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigma-70 family protein 4 n=1 Tax=Achromobacter piechaudii HLE RepID=J4PEA0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 212.0
  • Bit_score: 219
  • Evalue 3.90e-54
RNA polymerase sigma factor sigma-70 family protein 4 {ECO:0000313|EMBL:EJO32122.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 212.0
  • Bit_score: 219
  • Evalue 5.40e-54
sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 212.0
  • Bit_score: 207
  • Evalue 3.30e-51

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Taxonomy

Achromobacter piechaudii → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGAAGCGGGAGGAATACTCGCCCGGCGTCCCCGCCGAGCCGCTTGCCGCAGCCACGCCTGCCACCCACATCGGCCAGGTCTATGCACGCTGGCGCCGGGCCTTTCTGCGCGGCCTGGGCCGTGCCAGCAGCAGTGACACGCCGGCCGAAGACTCGCTGCACGATGCCGTCGTCAAATTCATGGCGGCCAATGCCCCGCTGGCCAGCGCCGACGAAACCCGCGCCTACCTGCACAAAATCGTTCGCAACGGCATGGCCGAGGAAGCGCGCGAGCGCCAGGCTGGCCGCACGCTGCGCACCGTGCTGCTCGAAGACGCCGAAGCTGAAAACCTCGCCGCCCCGGATGACGCGGATCCGCTGCACGCCGCCGCCCAGCGCCAGCGCATGGCGCGGCTGCAACAGGCGCTGGACGAACTGCCCGAGCGCCAGCGCGAGGCCTTCGTCCTCCATCGCTTCGACGGCCTCACCCAAGACGAAGTAGCCGCGCACATGGGCATCTCGCGCCGCATGGTCGTCAAGCACCTGGGCCGGGCCATGGCGTACTGCGAAGTGCGCGTGCTGTATGCCAGCGCCGAGCAAATGCGGCTCAAGCACCCGCCGCGACCAGAGGGTGGTGACGACGAAGAACACGAAGGCGACACGACGAGCGCCCGCCAACCCCGATGA
PROTEIN sequence
Length: 222
MKREEYSPGVPAEPLAAATPATHIGQVYARWRRAFLRGLGRASSSDTPAEDSLHDAVVKFMAANAPLASADETRAYLHKIVRNGMAEEARERQAGRTLRTVLLEDAEAENLAAPDDADPLHAAAQRQRMARLQQALDELPERQREAFVLHRFDGLTQDEVAAHMGISRRMVVKHLGRAMAYCEVRVLYASAEQMRLKHPPRPEGGDDEEHEGDTTSARQPR*