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scnpilot_p_inoc_scaffold_2144_14

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(11740..15054)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 999.99
  • Bit_score: 2023
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=RPOC_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 999.99
  • Bit_score: 2023
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 999.99
  • Bit_score: 2023
  • Evalue 0.0

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3315
AACGGCCGCCGCGGCAAGGCCATGACGGGCGCGAACAAGCGCGCGCTCAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGATTACTCCGGCCGTTCGGTGATCACCGTGGGCCCGACGCTGAAGCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTGGAGCTGTTCAAGCCCTTCATCTTCTCGCGCCTCGAAGCCATGGGCATCGCCACGACGATCAAGGCCGCGAAGAAGGAAGTGGAAGCCGGCACGCCGGTGGTGTGGGACATCCTGGAAGAGGTCATCAAGGAGCACCCGGTGCTGCTGAACCGCGCGCCCACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCCATCCTGATCGAAGGCAAGGCCATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACGTCCCCCTGTCGGTGGAAGCGCAGATGGAAGCCCGCACGCTGATGCTGGCCTCCAACAACGTGCTGTTCCCGGCCTCGGGCGAGCCGTCCATCGTGCCCTCGCAGGACGTGGTGCTGGGCCTGTACCACGCCACGCGCGACAAGATCAACGGCAAGGGCGAGGGCCTGGTGTTCGCCGACACCGGCGAAGTCCAGCGCGCACTCGACGCGGGCGAGGCCGAGCTGCACGCCAAGATCAGCGTGCGCCTGACCGAGTGGACCCGCGACAAGGCCACGGGCGAATTCGTGCCCGAGACCAAGCTCGTGGACACCACCGTGGGCCGCGCGCTGCTGAGCGAGATCCTGCCCCGCGGCCTGCCCTTCAGCAACCTGAACAAGGCGCTGAAGAAGAAGGAAATCTCCAAGCTCATCAACGCCAGCTTCCGCAAGTGCGGCCTGAAGGAAACCGTGGTGTTCGCCGACAAGCTGCTGCAGAACGGCTTCCGCCTGGCGACGCACGCCGGCTTCTCGGTGGCCATCGACGACATGCTGGTGCCGCCGCAGAAGGCCGACATCCTGGCCCGCGCCGAGGCCGAGGTGAAGGAGATCGAGCAGCAGTACGTCTCCGGCCTGGTCACGTCGGGCGAGCGCTACAACAAGGTCGTGGACATCTGGGGCAAGGCCGGCGACGACGTGTCCAAGGTGATGATGGACCAGCTCAAGGTGCAGAAGACCATCGACCGCCACGGCAACGAAGTCAACCAGGAGTCGTTCAACGCCATCTACATGATGGCCGACTCGGGCGCGCGGGGTTCTGCCGCCCAGATCCGCCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAGCCGGACGGCTCGATCATTGAAACGCCTATCACCGCGAACTTCCGCGAAGGCCTGAACGTGCTGCAGTACTTCATCTCCACCCACGGCGCCCGCAAGGGCCTGGCGGATACGGCGCTGAAGACCGCGAACTCGGGCTACCTCACGCGCCGCCTGGTGGACGTGACGCAGGACCTGGTGGTGAACCAGGAAGACTGCGGCACCAGCAACGGCTCGCTGATGCGCGCCATCGTCGAGGGCGGCGAGGTGATCGAGTCGCTGCGCGACCGCATCCTGGGCCGCACCACGGCAGAGGAAGTGCTGCACCCCGAAACCCGCGCCGTGCTCGCTCCGGCGGGCCGCATGCTCGATGAAGACCTCATTGAGGAGCTGGAAGCCGTGGGTGTGGACGAGGTCAAGGTGCGCACCGCGCTGACCTGCGAAACCCGCTTCGGCCTGTGCGCCAAGTGCTACGGCCGCGACCTGGGCCGCGGCGGCCTGATCAACCTCGGCGAAGCCGTGGGCGTGATCGCCGCGCAGTCCATCGGCGAACCCGGCACGCAGCTGACCATGCGCACGTTCCACATCGGCGGCGCCGCTTCGCGCGCCGCCATCGCGTCGAGCGTGGAAGCCAAGTCGAACGGCCTGGTCGCCTTCAACGCCACGATGCGCTACGTCAGCAACACCAAGGGCGAGCTGGTGGTGATCGCGCGTTCCGGCGAGATCATCATCCAGGACGACCATGGCCGCGAGCGCGAGCGCCACAAGGTGCCGTACGGCGCGGTGCTGACCGTCAAGCCCGACGAAGCCATCAAGGCCGGCAAGATCCTGGCCAACTGGGACCCGCTGACGCGCCCGATCATCACGGAATTTGCCGGCCAGGTGAAGTTCGAGAACATCGAGGAAGGCCTCACCGTGGCCAAGCAGGTGGACGACGTGACCGGCCTGTCCACGCTGGTGGTGATCGACCCCAAGCGCCGCGGCTCCGCCAAGGTGGTGCGCCCGCTGGTCAAGCTGGTGGACGCGAACGGCCAGGAGGTGAAGATCCCCGGCACCGACCACTCGGTGGCCATCGGCTTCCAGGTGGGCGCGCTGATCCAGGTGCGCGACGGCCAGGACGTGGGCCCCGGCGAAGTGCTGGCGCGCATTCCGGTCGAAGGCCAGAAGACGCGCGACATCACCGGCGGTCTGCCGCGCGTGGCAGAGCTGTTCGAGGCCCGCACGCCCAAGGACAAGGGCACGCTGGCCGAGATGACCGGCACCATCTCCTTCGGCAAGGAAACCAAGGGCAAGGTGCGCCTGCAGATCACCGACCCGGACGGCAAGGTGTGGGAAGAGCTGATCCCCAAGGAAAAGAACATCCTGGTGCACGAAGGCCAGGTGGTCAACAAGGGCGAGCACATCGTGGACGGCCCGGCCGATCCGCAGGACATCCTGCGCCTGCTGGGCATCGAGGAACTCTCGCGCTACATCGTCGATGAAGTGCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGCCGCGTCGTGGTCGAGAACCCGGGCGAGTCCAGCTACATCGGCGGCGAGCAGGTCGAGCGCAGCGAGATCCTCAACACCAACGAGGCGCTGCAGGCCGAGGGCAAGATTCCCGCCACGTACTCCAACGTGCTGCTGGGCATCACCAAGGCGTCGCTGTCCACCGACTCGTTCATCTCCGCCGCGTCGTTCCAGGAAACCACGCGCGTGCTCACCGAGGCGGCCATCATGGGCAAGCGCGACGAGCTGCGCGGCCTGAAGGAAAACGTCATCGTGGGCCGCCTGATCCCGGCTGGCACGGGCCTGGCCTACCACCAGGCGCGCAAGGTCAAGGATGCCATGGACGACGCCGAGCGCCGCGCCATCGCCGAGGCCGAAGCCGCCGAGATGGCTGCCGTCACCGAAGGCGCCGATGAGCCCGAGGTGAACGCCCACGCGGGCGACGCCGCCGACTAA
PROTEIN sequence
Length: 1105
NGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYHATRDKINGKGEGLVFADTGEVQRALDAGEAELHAKISVRLTEWTRDKATGEFVPETKLVDTTVGRALLSEILPRGLPFSNLNKALKKKEISKLINASFRKCGLKETVVFADKLLQNGFRLATHAGFSVAIDDMLVPPQKADILARAEAEVKEIEQQYVSGLVTSGERYNKVVDIWGKAGDDVSKVMMDQLKVQKTIDRHGNEVNQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVNQEDCGTSNGSLMRAIVEGGEVIESLRDRILGRTTAEEVLHPETRAVLAPAGRMLDEDLIEELEAVGVDEVKVRTALTCETRFGLCAKCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGLVAFNATMRYVSNTKGELVVIARSGEIIIQDDHGRERERHKVPYGAVLTVKPDEAIKAGKILANWDPLTRPIITEFAGQVKFENIEEGLTVAKQVDDVTGLSTLVVIDPKRRGSAKVVRPLVKLVDANGQEVKIPGTDHSVAIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARTPKDKGTLAEMTGTISFGKETKGKVRLQITDPDGKVWEELIPKEKNILVHEGQVVNKGEHIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENPGESSYIGGEQVERSEILNTNEALQAEGKIPATYSNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDDAERRAIAEAEAAEMAAVTEGADEPEVNAHAGDAAD*