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scnpilot_p_inoc_scaffold_2200_3

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 1016..1561

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7F6_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 171.0
  • Bit_score: 177
  • Evalue 1.10e-41
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:ENO90497.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thaue similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 171.0
  • Bit_score: 177
  • Evalue 1.50e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 172.0
  • Bit_score: 174
  • Evalue 2.50e-41

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Taxonomy

Thauera linaloolentis → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
TTGACAATCATTCTCAAAATCAAGCCTGCCATCTTGCCTGCCGACCTCACCGCCCGCCCCGCGCCCCTGGACCTTGGCGCGCTGCACGCCAGCCACCATGGCTGGCTCGTGGGCTGGCTGCAGGGCCGCCTGCGCAGCCGCGCCGACGCCGCCGACATCGCGCAGGACGTGTTCCTGCGCCTGCTGCGCCAGCCCGAACCGCAGGCCCCGCGCGCGCCGCGCGCCTACCTCGCGACCATCGCGCAGCGCCTGGCCGCCAACCTGCACCGCCGGCGCTGCCTGGAGCAGGCCTACCTGGACGCGCTGGCCGCCCTGCCCGAGGACGCCATGCCCTCGCCCGAGGACCAGCTCGCGCTGCGCCAGGCCGTGGCCGAGATCGACGACGCCCTCAGCGCCCTGGGCCCCAAGGTCAAGCGCGCCTTCCTGCTCGCGCAGTTCGAGGGCCTGGGCTATGCCGCCATCGCGCAGCAGCTCGGCGTCACGCCGCGCACCGTGGTCAACTACGTCGCCCGGGCCATGGCGCAGTGCTGCCTGCACGCGCCATGA
PROTEIN sequence
Length: 182
LTIILKIKPAILPADLTARPAPLDLGALHASHHGWLVGWLQGRLRSRADAADIAQDVFLRLLRQPEPQAPRAPRAYLATIAQRLAANLHRRRCLEQAYLDALAALPEDAMPSPEDQLALRQAVAEIDDALSALGPKVKRAFLLAQFEGLGYAAIAQQLGVTPRTVVNYVARAMAQCCLHAP*