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scnpilot_p_inoc_scaffold_1873_6

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 5018..6205

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARZ1_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 383.0
  • Bit_score: 487
  • Evalue 1.80e-134
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 383.0
  • Bit_score: 487
  • Evalue 5.00e-135
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEF87777.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delft similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 383.0
  • Bit_score: 487
  • Evalue 2.50e-134

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGTGGCAACGACGACGGTGCATCGGGAGGGGCCTTGGCGGCTGGTGGCCGCTGCGGCCTTGGCGGTGCTGGTGGCAGGCTGCGGGCAGGGCCAGCCTTCTGGCAACGGGCAGGATGCGGAACCTGTGGCCGTGGACGTGGTGGCGGTGCAGCCGCAGCCGCTGCCGGTGCGCAGCGAGTTGCCGGGCCGGGTGGAGCCGATGCGCCTGGCCGAGGTGCGGGCGCGGGTGGCGGGCATCGTGCTCGGCCGCCATTTCCAGGAAGGCGCGGACGTCAAGGCGGGGGATGTGCTGTTTTCCATCGACCCGGCGCCGCTGCGCACGGCGCTGGCGCGCGCCCAGGGCGAGCTGGCGCGGGCCGAGGCGGCCTTGGGCGAGGCGCAGGCGCTGGTGCGCCGCTATGCGCCGCTGGCGGAGGTCGAGGCCGTGAGCCGGCAGGACTTCGAGACGGCCCAGGCCGGCCTGCGCAGCGCCCAGGCGGTGCGCCAGTCGGCGCAGGCCGAGGTGGACGCAGCCCGGCTGAACCTGGCGTACGCCACGGTCAGGGCGCCGATCTCCGGGCGCATCGGCCGCGCCCTGGTGAGCGAAGGCGCCCTGGTGGGCCAGGGCGAGGCCACGCCGATGGCCGTCATCCAGCAACTGCACCCCATCTACGTCGACTTCCAGCAGCCGCTGGCCGAGGCCCAGCAGTGGCGTGCTGCCATGGCCCAGGGGCAACTGATGCCGCACGCGGGCCAGGGCGCCCAGGTCACGCTGACGCTTGACGGCGCCGGGCTGCAGCGCGAGGGGCGCCTGCTGTTCTCCGATGCGACGGTGGACCGCCAGACCGGCCAACTGGCGTTGCGCGGCCAGTTCGACAACCGCGACGCCGCGCTGCTGCCCGGCATGTACGTGCGGGTGGGCATGCGCCAGGGCGTGAACCCGTCCGCCATCCTCGTGCCGCAGCGGGCGGTGCGGCGCGATGCCGAGGGCAAGGCACGGGTCATGGTGGTGGATGCGCAGGGTGTGGTGCAGGCGCGGCCCGTGCAGACCGGCGCCATGCAGGGCGCGCAATGGCACATCAAGCAAGGGCTGAAGCCGGGCGAGCTGGTGGTGGCGGGGCGCCTGGCGGCCGCGCAGCCGGGCGCCAGGGTCAAGCCCGAGGTGGTGGCCGATGCCGCGGCGGGCCTTGGCGTGGCCGAGGAATAG
PROTEIN sequence
Length: 396
MVATTTVHREGPWRLVAAAALAVLVAGCGQGQPSGNGQDAEPVAVDVVAVQPQPLPVRSELPGRVEPMRLAEVRARVAGIVLGRHFQEGADVKAGDVLFSIDPAPLRTALARAQGELARAEAALGEAQALVRRYAPLAEVEAVSRQDFETAQAGLRSAQAVRQSAQAEVDAARLNLAYATVRAPISGRIGRALVSEGALVGQGEATPMAVIQQLHPIYVDFQQPLAEAQQWRAAMAQGQLMPHAGQGAQVTLTLDGAGLQREGRLLFSDATVDRQTGQLALRGQFDNRDAALLPGMYVRVGMRQGVNPSAILVPQRAVRRDAEGKARVMVVDAQGVVQARPVQTGAMQGAQWHIKQGLKPGELVVAGRLAAAQPGARVKPEVVADAAAGLGVAEE*