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scnpilot_p_inoc_scaffold_2071_18

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(14400..14567)

Top 3 Functional Annotations

Value Algorithm Source
Linocin_M18 bacteriocin protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHD1_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 55.0
  • Bit_score: 80
  • Evalue 7.10e-13
Linocin_M18 bacteriocin protein similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 55.0
  • Bit_score: 81
  • Evalue 8.80e-14
Putative bacteriocin {ECO:0000313|EMBL:GAJ93468.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 55.0
  • Bit_score: 81
  • Evalue 4.40e-13

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
GTGCTCTCCACGCGCGGCGGCGACTTCGAGCTGCACCTGGGCAGCGACCTCGCCATCGGCTACCTGAGCCACAGCGAGACGCACGTGAAGCTGTACCTGGAGGAGACGCTCACCTTCCGCCTGCTGACGGCCGAGGCGGCGGTGGCGATCCTGCCAGCGCAAGCCTGA
PROTEIN sequence
Length: 56
VLSTRGGDFELHLGSDLAIGYLSHSETHVKLYLEETLTFRLLTAEAAVAILPAQA*