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scnpilot_p_inoc_scaffold_2884_8

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(7672..8964)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UV22_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 433.0
  • Bit_score: 344
  • Evalue 1.50e-91
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 433.0
  • Bit_score: 344
  • Evalue 4.40e-92
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU37534.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 433.0
  • Bit_score: 344
  • Evalue 2.20e-91

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGACCGCCCAGGCCGCCGCTTCGCCGCTGCTCGCGAGCTTTCGCGACAGCTACCGCGACCTCGTGCGCTACCTCACGCGCCGCACCGGCAGCGCCGATGAGGCCCGCGACGTGGCGCACGATACCTGGCTGCGTCTGGCCGACATGAGCCTGCGCGACACCCCGCCCGTGCAGTGCGAATCCGAGGCCCGCGCCTACGTCTTCACCATGGCGCGCAACCTCGTCACCGACCGCCGCCGCCACGACAGCGTGGCACAGCGCCACGCACAGGCCCAGCCCGGCGGCGGCCAGGGCGTGCCCGACGAGTCCGAGGCGCTGATGTACCGCCAGGCCATCGACGCGGTCGAGGCCGCGCTGGCCACCGTGCCCGAGCGCGCGCGCCAGGTCTTCCTTCGTCACCGCGTCAACGGTGAGGACCAGGGCGCGCTGGCGGCCGAGTTCGGCATCTCGCGCAACATGGTCGAGCGCGACATGATGCTGGCCATGGACCGGGTGCAGGCCGCCATGGAACAGTGGCACGGCGGCGCAGCGCCCGCCACGCGCCAGGGGCGCCGCCGCGCGCTCTCGGGGCTGCTGGGCATGGCCGGCCTTGCGGTGCCGGGCGCGTTCGCATGGCGCTGGTGGCGCATCGCCGTGCCCCAGTGGCAGCAGGCCGCCGCCACCGGCCACGGGCAGACGCTGCGCCAACCCCTTCCCGACGGCGGCGCCGTCACACTCGACGCGCAAAGCCGCGTGCAGGTCGCCTACTACGCCGCCCGCCGCAGCGCCCAACTGCTCGCGGGCGCCGCCTTCTTCGAGGTGGCGCGCGATGCAGGCCGCCCCTTCGTGGTGGACGTGCCCGGCGCGCAAGGCGCCGTGCGCATCACCGTGCTGGGCACCCGCTTCGGCGTGGAGCGGCTGCCTGGCGGCGCGGTGGACGTGCAGGTGGAATCGGGCCGCGTGCGCGTCGAATCGCTCGACGCCGAAGGCCACCCGCGCACCACCCACGAACTGGGCGGCGGCGAGGCCCTGTGCGTGCAAGGCGCCACAAGCGCACAGCCGCGCGCCAGCACCCACGCCGCGCCCTGGCGCAACGGCCTCGTGGTCTTTGCCGACGTGCCCCTGGCCGAAGCCATCGACCGCCTGCGCCGCTACCTGCCGCGCCCTGTGGAAGTGAGCGCCGACGCGGCAGCACTGCGCCTGTCGGGCCAGGCGCGCATCGCCCAGGCGGAAGACTTCGTGCGCGCCCTTCCATCCGCCGTGCCCGTGCGCGCCCGGCTGGAGGAGGGGCGCTGGCGCATTACGGCGCGCTGA
PROTEIN sequence
Length: 431
MTAQAAASPLLASFRDSYRDLVRYLTRRTGSADEARDVAHDTWLRLADMSLRDTPPVQCESEARAYVFTMARNLVTDRRRHDSVAQRHAQAQPGGGQGVPDESEALMYRQAIDAVEAALATVPERARQVFLRHRVNGEDQGALAAEFGISRNMVERDMMLAMDRVQAAMEQWHGGAAPATRQGRRRALSGLLGMAGLAVPGAFAWRWWRIAVPQWQQAAATGHGQTLRQPLPDGGAVTLDAQSRVQVAYYAARRSAQLLAGAAFFEVARDAGRPFVVDVPGAQGAVRITVLGTRFGVERLPGGAVDVQVESGRVRVESLDAEGHPRTTHELGGGEALCVQGATSAQPRASTHAAPWRNGLVVFADVPLAEAIDRLRRYLPRPVEVSADAAALRLSGQARIAQAEDFVRALPSAVPVRARLEEGRWRITAR*