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scnpilot_p_inoc_scaffold_2457_4

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 3549..4055

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCE5_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 153.0
  • Bit_score: 224
  • Evalue 9.10e-56
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 153.0
  • Bit_score: 224
  • Evalue 2.60e-56
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABL73189.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 153.0
  • Bit_score: 224
  • Evalue 1.30e-55

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Taxonomy

Paracoccus denitrificans → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGCCGGACAACGAACACGCGCTGCGCCAGCAAGGCATCGAAGGCCTGTACATCGACCACCACGGCTGGCTGCAGGCGTGGCTGCGCCGCAGGCTCGGCAATGCGTTCGACGCGGCCGACCTGGCGCACGACACCTTCGTGCGCGTCATGGCCTCGCAGTGCACACAGTGGGGCCGCGAGCCGCGCGCGCTGCTCACGCACATCGCCAAGGGCCTGGTCATCGACCACTGGCGGCGCCAGGAGGTCGAGGCCGCCTACCTCGACGCCATCGCCCGCCTGCCCGCGCCCCATACGCCCTCGCCGCAGGCGCGCCTGCTGGCCATCGAGGCCCTGGTGCGCATCGACGCCATGCTCGCCAGCCTGCCGCCGTTCACCCGCGAGGTCTTCCTGCTGGCGCAGCTCGACGGCCTCACGCTCCAGCAGATCGCCGAACGCACGCAAAAGCCTGCCATCACCGTGCGCCGCCACATCCACAAGGCGCTGGTGGCCTGCATGGCCCTCGATTAG
PROTEIN sequence
Length: 169
MPDNEHALRQQGIEGLYIDHHGWLQAWLRRRLGNAFDAADLAHDTFVRVMASQCTQWGREPRALLTHIAKGLVIDHWRRQEVEAAYLDAIARLPAPHTPSPQARLLAIEALVRIDAMLASLPPFTREVFLLAQLDGLTLQQIAERTQKPAITVRRHIHKALVACMALD*