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scnpilot_p_inoc_scaffold_2742_14

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(13947..14405)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein id=12550682 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 174.0
  • Bit_score: 248
  • Evalue 4.10e-63
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 173.0
  • Bit_score: 247
  • Evalue 1.70e-62
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 170.0
  • Bit_score: 243
  • Evalue 4.80e-62

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGGGCAACAAACTGTATGTCGGCAACCTGCCCTATTCGGTGCGCGACAACGATCTGGAACAAGCGTTCAGCGCCTTCGGCGCCGTCACCAGCGCCAAGGTCATGATGGAGCGCGATACAGGGCGCTCCAAGGGCTTCGGCTTCGTGGAGATGGGCAGCGATGCCGAGGCGCAAGCCGCCATCAACGGCATGAACGGCCAGCCCCTGGGCGGCCGCAGCATCGTCGTCAACGAAGCGCGCCCGATGGAGCCCCGGCCGCCGCGCAGCGGTGGCTTTGGTGGCGGTGGCGGTGGCGGCTTCGGCGGTGGTGGCCGCAGTGGCGGCGGCTTCGGCGGCGGCCGTGACGGCGGCAGCCGCGAAGGGGGCTTCCGCAGCCCCTACGGCGCTGGCCCGCGCGGCGGCGGCAACGGCGGTGGCCGTGGCGGCTACGGCGGTGGCCGTGGCGGCGACAGCTACTGA
PROTEIN sequence
Length: 153
MGNKLYVGNLPYSVRDNDLEQAFSAFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVNEARPMEPRPPRSGGFGGGGGGGFGGGGRSGGGFGGGRDGGSREGGFRSPYGAGPRGGGNGGGRGGYGGGRGGDSY*