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scnpilot_p_inoc_scaffold_3252_17

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(15920..17128)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 386.0
  • Bit_score: 577
  • Evalue 3.70e-162
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 386.0
  • Bit_score: 577
  • Evalue 1.90e-161
Pseudouridine synthase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W572_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 386.0
  • Bit_score: 577
  • Evalue 1.30e-161
  • rbh

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGAATGACAACACCCCCACCGACGCTGTAGAAACGGACGCGCCAACCGGGCCTGCCAAGGCGGATGCGCGGCAGACGCCGCGCAAGAAGGCGCCCCGGCCCGCCGCTGCGGCTGTGCCCGATGGCTACCAGTTTGCCGACGTGGTTTCTGGCGCCTTCGATGAGGACGAAGGGCGGGCCGATGTGCCCGTGCCCAAGCGGGTGCTTTTGCCGCAGCCCGAGACGCCGAAGCTGCACAAGGTGCTGGCCCAGGCCGGGCTGGGCTCGCGCATCGAGATGGAGCAGATGATCCTGGAAGGACGCATCTCGGTGAACAACGAGCCCGCCCATGTCGGGCAGCGCGTGCAGTATGGCGACCAGGTCAAGGTCAACGGCAAGCCGATCCGTTTCCGCATCGAGCCGCCGCCCGTGCGCGTGATCGCCTACCACAAGCCGGTGGGCGAGGTGGTGACGCACGACGACCCGCAGAACCGCCCCACGGTGTTCCGCAGGCTGCCACGCCTGGTGCAGGGCAAATGGCAGTCGGTGGGGCGGCTGGACCTGAATACCGAAGGCCTGCTGCTGTTCACCAGTTCGGGCGATCTGGCCAACAAGCTGATGCACCCGCGCTTCGGCCTGGAGCGTGAGTACGCGGTGCGCGTGCTCGGCGCCTTGAGCGATGAGGAGCGCCAGACGCTGCTCGATGGCGTGCAGCTCGACGATGGCCCGGCCGCGTTCGGCTCCATCGAGGACGGCGGCGGCGAGGGCGCCAACCGCTGGTACCGCGTCACCATCTCCGAGGGGCGCAACCGGGAAGTGCGCCGTCTCTTCGAGGCCGTGGGCCATGCGGTGAGCCGGCTCATCCGCATCCGCTACGGCGCCATGCTGCTGCCGCGCGGCCTCAAGCGCGGTGCGTGGATGGAGCTGGACGAGCAGGACATCCGCGCGCTCATGGCGGCGGCGGGCATGCAGGAGCGGCCACGCGCAGCGCAGGGGCAGGGTGCCGGCCGCGGCCGGCGTGCGGGAGCCGCTCCGCGCGGCCCAGGCGGGGCAGCGGGCGCGCGCAAGGCGCAGGGCGCTTCGCAGAATGCGCCGCAGCGTGGCCGGGGTCCGGGCGGTGGTGCGCAGCCCGATCCCATGAAGACTTCGCTGGGATACATCGGGGCCGACAGCCTTTCACGCCAGCGGCAGGGGCAGAAACGCAACGCCCCCCGCAGGGGCGGGCGCTGA
PROTEIN sequence
Length: 403
MNDNTPTDAVETDAPTGPAKADARQTPRKKAPRPAAAAVPDGYQFADVVSGAFDEDEGRADVPVPKRVLLPQPETPKLHKVLAQAGLGSRIEMEQMILEGRISVNNEPAHVGQRVQYGDQVKVNGKPIRFRIEPPPVRVIAYHKPVGEVVTHDDPQNRPTVFRRLPRLVQGKWQSVGRLDLNTEGLLLFTSSGDLANKLMHPRFGLEREYAVRVLGALSDEERQTLLDGVQLDDGPAAFGSIEDGGGEGANRWYRVTISEGRNREVRRLFEAVGHAVSRLIRIRYGAMLLPRGLKRGAWMELDEQDIRALMAAAGMQERPRAAQGQGAGRGRRAGAAPRGPGGAAGARKAQGASQNAPQRGRGPGGGAQPDPMKTSLGYIGADSLSRQRQGQKRNAPRRGGR*