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scnpilot_p_inoc_scaffold_3884_8

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(10938..11456)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B285_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 156.0
  • Bit_score: 187
  • Evalue 1.30e-44
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EZP39931.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 170.0
  • Bit_score: 217
  • Evalue 2.10e-53
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 156.0
  • Bit_score: 187
  • Evalue 3.60e-45

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Taxonomy

Janthinobacterium lividum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGCCCCAGCCGCCGCTTTCCGCCGCCGATTCCGCCGCTGCCTCCTCCCTGTTCACCGACCACCACGGCTGGCTGCTGGGCCGGCTGCGCCAGCGCCTGCGCAACACGGCCGAGGCGGAGGACGTGGCCTCGGAAGCCTTTGCGCGCGTCATCGGCTACCGCCGCCTGCAGGCGCTGCAGGAGCCGCGCGCCTACCTCACCACGGTGGCTAAGAGCATCCTGCTGCAGTTCTGGCGCCGCCGCGACCTGGAGCGCGCCTGGATCGACAGCCTGGCGCTGGCGCCCGAAACCTTCGCGCCCTCGCCCGAGGAGCGCGCCCTGTGGCTCGAATCGCTGGAGCGCATCGCGCAAGCGCTCGACGGGCTTTCGCCCCGGGCGCGCCAGGCCTTCCTGCTGAGCCAGCTTGACGGCTTGACTTACGCGCAGATCGCCGAGCGACTCGGCGTGTCGGCCAGCATGGTGCGCAAGTACATGGCGCAGGGCCTGCAGCAGTGCATGCGCGCGGTCGATGAAGGCTGA
PROTEIN sequence
Length: 173
MPQPPLSAADSAAASSLFTDHHGWLLGRLRQRLRNTAEAEDVASEAFARVIGYRRLQALQEPRAYLTTVAKSILLQFWRRRDLERAWIDSLALAPETFAPSPEERALWLESLERIAQALDGLSPRARQAFLLSQLDGLTYAQIAERLGVSASMVRKYMAQGLQQCMRAVDEG*