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scnpilot_p_inoc_scaffold_5622_5

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 2255..2950

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=2 Tax=Acidovorax RepID=RL1_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 231.0
  • Bit_score: 426
  • Evalue 1.70e-116
rplA; 50S ribosomal protein L1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 231.0
  • Bit_score: 428
  • Evalue 8.00e-117
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 231.0
  • Bit_score: 426
  • Evalue 4.70e-117

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCGAAGCTGACCAAGAAGCAAAAGGCCCTGCAGGGCAAGGTGGACTCCACCAAGCTGTATCCCTTCGCCGAGGCCGTGGTGCTGGTGAAGGATGCCGCGACAGCCAAGTTCGATGAGTCCATCGACGTGGCCGTGCAACTGGGCGTGGACGCCAAGAAGTCCGACCAAGTGGTGCGTGGCGCCGTCGTGCTGCCGCACGGCACTGGCAAGACTACCCGCGTGGCTGTGTTCGCCCAGGGTGCCAAGGCCGAGGAAGCCAAGGCCGCTGGCGCCGACATCGTCGGCATGGACGACCTGGCTGCCCAGGTCAAGGCCGGTGACATGCCCTTCGACGTGGTCATTGCCGCACCCGACGCAATGCGCGTCGTGGGTACGCTGGGCCAGATCCTCGGCCCGCGCGGCCTGATGCCGAACCCCAAGGTCGGCACGGTGACGCCCGACGTCGCCACGGCCGTGAAGAATGCCAAGGCGGGTCAGGTGCAGTTCCGCGTCGACAAGGCCGGCATCATCCACAGCACGATCGGCCGCCGTTCTTTCGACAACGAGAAGCTGCAAGGCAACCTCGCTGCGCTGATCGACGCGTTGAACAAGGCCAAGCCGGCCACGAGCAAGGGTCTGTACCTGCGCAAGGTGGCTGTGTCCTCGACCATGGGTGTCGGCGTTCGCGTCGACACGCAATCCATCGCAGCCTGA
PROTEIN sequence
Length: 232
MAKLTKKQKALQGKVDSTKLYPFAEAVVLVKDAATAKFDESIDVAVQLGVDAKKSDQVVRGAVVLPHGTGKTTRVAVFAQGAKAEEAKAAGADIVGMDDLAAQVKAGDMPFDVVIAAPDAMRVVGTLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGIIHSTIGRRSFDNEKLQGNLAALIDALNKAKPATSKGLYLRKVAVSSTMGVGVRVDTQSIAA*