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scnpilot_p_inoc_scaffold_5622_9

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 4406..8338

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 870.0
  • Bit_score: 1641
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) Tax=CG_Rhodof_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 865.0
  • Bit_score: 1560
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Vibrio cholerae 12129(1) RepID=C2C4U9_VIBCL similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 999.99
  • Bit_score: 1555
  • Evalue 0.0

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Taxonomy

CG_Rhodof_01 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3933
ATGGCCCAAACATCCACGTACAGCTACACCGAACGCAAGCGCATCCGCAAGAGCTTCGGTAGCCGTGACAGCGTGCTCGAAGTGCCTTACCTGCTGCAGATGCAGAAGGACGCATACACCGCCTTCCTGCAGGCCGACACTCCTCCCAAGAAACGCAGCGGCGATGGCCTCCAGGCCGCGTTCAATTCGGCATTCCCGATTGTCTCGCACAACGGCTTCGTGGAAATGAAGTTCGTCGAGTACAACCTGGCCAAGCCCGCGTTCGACGTGCGCGAGTGCCAGACGCGCGGCCTGACCTTCGCCTCGGCCGTGCGCGCCAAGGTGCAGCTCATCATCTACGACCGCGAGTCTTCCACGTCGCAGTCCAAGGTGGTCAAGGAAGTGAAGGAGCAGGAGGTCTACATGGGCGAGGTGCCCCTGATGACCGACAAGGGCTCGTTCATCATCAACGGCACCGAGCGCGTGATCGTCTCGCAGTTGCACCGCTCGCCAGGCGTGTTCTTCGAGCACGACAAGGGCAAGACCCATAGCTCGGGCAAGCTGCTGTTCAGCGCGCGCATCATTCCCTACCGTGGCTCGTGGCTGGACTTCGAGTTCGACCCCAAGGACATCCTGTATTTCCGCGTCGACCGCCGCCGCAAGATGCCGGTGACGATCCTGCTCAAGGCCATCGGCCTGAATCCCGAATCGATCCTGGCGAATTTCTTCGTCAACGACAACTTCCGCCTGATGGACAGCGGCGCGCAGATGGAGTTCGTGGCCGATCGCTTCAAGGGCGAAGTGGCGCGCTTCGACATCACCGACAAGTCGGGCAAGGTCATCGTCGCCAAGGACAAGCGCATCACCGCGCGCCACACGCGCGAACTGGAACAGTCGGGCACCACGCACGTGAGCGTGCCGGAAGATTTCCTGATCGGCCGCGTGCTGGCGCGCAACATCATCGACGGCGACACCGGCGAGATCATCGCCAAGGCCAACGAGGAACTGACCGAGGCGCTGCTGAAGAAGCTGCGCGCCGCTGGCGTGCAGGAAATCCAGTGCATCTACACCAACGAGCTCGACCAGGGCCCGTATATCTCGCAGACCCTGCGTATCGACGAAACTGCCGATGAGAACGCGGCGCGCGTGGCCATCTACCGCATGATGCGCCCCGGCGAGCCGCCAACCGACGACGCCGTGCAGGCGCTGTTCCAGCGCCTGTTCTACAGCGCCGACACGTACGACCTGTCGCGCGTCGGCCGCATGAAGTTCAACGCCAAGATCGGCCGTGACGAGTCCACGGGCCCGATGGTGCTGTCGAACGACGACATCCTGGCCGTGGTGAAGATCCTCGTGGACCTGCGCAACGGCAAGGGCGAGGTCGATGACATCGACCACCTGGGCAACCGCCGCGTGCGCTGCGTGGGCGAACTGGCCGAGAACCAGTACCGCACGGGCCTCGCGCGCATCGAGAAGGCTGTGAAGGAACGCCTGGGCCAGGCCGAGCAAGAGCCGCTGATGCCGCACGACCTGATCAACTCCAAGCCGATTTCCGCGGCGCTCAAGGAGTTCTTCGGCGCCTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGGCCGAAATCACGCACAAGCGCCGTGTGTCCGCACTGGGCCCGGGCGGTCTGACGCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACGTCACGCACTACGGCCGCGTCTGCCCGATCGAAACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCCCTGTACGCGCGCCTGAACGAGTACGGCTTCATCGAAACCCCGTACCGCCGCGTGGCGGATGGCAAGGTGACGATGGACATCGACTACCTGTCGGCCATCGAGGAAGGCAAGTACGTCATCGCCCAGGCCAACGCCACGCTGGACGCCGAAGGGCGCCTGACCGGCGAGCTGGTGTCGGCGCGCGAGAAGGGCGAATCGACGCTCGTTTCCGCCGATCGCGTGCAGTACATGGACGTGTCGCCGGCGCAGATCGTGTCGGTGGCGGCGTCGCTGGTGCCGTTCCTGGAGCACGATGACGCGAACCGCGCGCTGATGGGCGCCAACATGTCGCGCCAGGCCGTGCCCGTGCTGCGTCCCGAGAAGCCCCTGGTGGGCACGGGCATCGAGCGCGTGGCGGCGGTGGACTCCGGCACCGTGGTGACGGCCAAGCGCGGCGGCGTGGTGGACTACGTCGATGCGACCCGCATCGTGATCCGCGTGCACGACGCCGAGGCCGTGGCCGGCGAAGTGGGTGTGGACATCTACAACCTCATCAAGTACCAGCGTTCCAACCAGAACACCAACATCCACCAGCGCCCCATCGTCAAGCGCGGTGACGTGCTGGCCAAGGGTGACGTGATCGCCGACGGCGCATCGACCGATCTGGGCGAGATCGCCATCGGGCAGAACATGCTGATCGCGTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCAGCGAGCGCGTGGTGGCCGAAGACCGCTACACCTCGATCCACATCGAGGAACTGGTGGTGATGGCGCGCGACACCAAGCTGGGCGCCGAGGAAATCACGCGCGACATTCCGAACCTGTCGGGCAGCTCGGGCACCGTGATCGACGTGCAGGTGTTCACCCGCGAAGGCATCCAGCGCGACAAGCGCGCGCAGCAGATCATCGACGATGAACTCAAGCGCTTCCGCCTCGACCTGAACGACCAGCTGCGCATCGTCGAGGCCGATGCCTTCGACCGTATCGAGAAGTTGCTCGCCGGCAAGGTGGCCAATGGCGGCCCGCAGAAGCTGGCCAAGGGCACCAAGATCGACAAGGCCTACCTCGACGGCGTGGAAAAGCACCACTGGTTCGACATCCGCCCAGCCGATGAGGCCGTGGCCGCGCAGCTCGAATCCATGAAGAACGCCATGGAGCAGACGCGCCACAGCTTCGACCTGGCCTTCGAGGAAAAGCGCAAGAAACTCACGCAAGGCGACGAGCTGCCGGCCGGCGTGCTGAAGATGGTCAAGGTGTACCTGGCCGTCAAGCGCCGCCTGCAGCCCGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTCTCCAAGATCACGCCCGTGGAAGACATGCCCCACATGGCCGACGGCACGCCCGCCGACATCGTGCTGAACCCGCTGGGCGTGCCCTCGCGCATGAACATCGGCCAGGTGCTGGAAGTCCACCTGGGCTGGGCCGGCAAGGGCCTGGGCCAGCGCATCGGTGACATGCTGCGCGACCAGGCCGCCGCCGCCGAGGTGCGCCAGTTCCTCGAAGAGGTCTACAACACCCGCGGCCGCAAGGAAGACCTGAGCCAGCTGTCCGACGCCGAAGTCATGGCCATGGCCGGCAACCTGACCCACGGCGTGCCGTATGCATCGCCGGTGTTCGACGGTGCCTCCGAGGCCGAGATCAAGGACATGCTCAAGCTGGCCTATCCCGAGGACCTGAAGGCGCGCAAGGGCCTGACCGAGACGCGCACGCAGGCCTACCTGTACGACGGCCGCACGGGCGATCGCTTCGAGCGTCCGACGACCATCGGCTACATGCATTACCTGAAGCTGCACCATCTGGTCGACGACAAGATGCACGCGCGCTCCACCGGTCCGTACTCGCTGGTCACGCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAAGTGTGGGCGCTGGAAGCCTACGGCGCGTCCTACGTGCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGCAGGGCCGTACCAAGGTGTACGAGAACATCGTCAAGGGCGAACACGCGATCGAGGCAGGCATGCCCGAGTCGTTCAACGTGCTGGTCAAGGAAATCCGTTCCCTGGGCCTGGACATCGAGCTGGAACGTTCCTGA
PROTEIN sequence
Length: 1311
MAQTSTYSYTERKRIRKSFGSRDSVLEVPYLLQMQKDAYTAFLQADTPPKKRSGDGLQAAFNSAFPIVSHNGFVEMKFVEYNLAKPAFDVRECQTRGLTFASAVRAKVQLIIYDRESSTSQSKVVKEVKEQEVYMGEVPLMTDKGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLNPESILANFFVNDNFRLMDSGAQMEFVADRFKGEVARFDITDKSGKVIVAKDKRITARHTRELEQSGTTHVSVPEDFLIGRVLARNIIDGDTGEIIAKANEELTEALLKKLRAAGVQEIQCIYTNELDQGPYISQTLRIDETADENAARVAIYRMMRPGEPPTDDAVQALFQRLFYSADTYDLSRVGRMKFNAKIGRDESTGPMVLSNDDILAVVKILVDLRNGKGEVDDIDHLGNRRVRCVGELAENQYRTGLARIEKAVKERLGQAEQEPLMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLAEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFIETPYRRVADGKVTMDIDYLSAIEEGKYVIAQANATLDAEGRLTGELVSAREKGESTLVSADRVQYMDVSPAQIVSVAASLVPFLEHDDANRALMGANMSRQAVPVLRPEKPLVGTGIERVAAVDSGTVVTAKRGGVVDYVDATRIVIRVHDAEAVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVKRGDVLAKGDVIADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILISERVVAEDRYTSIHIEELVVMARDTKLGAEEITRDIPNLSGSSGTVIDVQVFTREGIQRDKRAQQIIDDELKRFRLDLNDQLRIVEADAFDRIEKLLAGKVANGGPQKLAKGTKIDKAYLDGVEKHHWFDIRPADEAVAAQLESMKNAMEQTRHSFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKITPVEDMPHMADGTPADIVLNPLGVPSRMNIGQVLEVHLGWAGKGLGQRIGDMLRDQAAAAEVRQFLEEVYNTRGRKEDLSQLSDAEVMAMAGNLTHGVPYASPVFDGASEAEIKDMLKLAYPEDLKARKGLTETRTQAYLYDGRTGDRFERPTTIGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVQGRTKVYENIVKGEHAIEAGMPESFNVLVKEIRSLGLDIELERS*