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scnpilot_p_inoc_scaffold_12196_3

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1173..1712)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Acidovorax sp. CF316 RepID=J1EK89_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 179.0
  • Bit_score: 325
  • Evalue 3.10e-86
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJA09132.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 179.0
  • Bit_score: 327
  • Evalue 1.50e-86
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 179.0
  • Bit_score: 313
  • Evalue 3.40e-83

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGAGACAGATTACCAACTGGCCTTCGAGCTGGCCCCGGTGGGCCTGGTGTTATCACGCAACCGTGCCATGGTGGACTGCAACCGCCATGTCTGCGACATGTTCGGCGCCTCGCGCGAACTGATGGTGGGGCAGTCGTTCCAGATCCTGTACCCCAGCGCCGACGAATACGAGCGCCTGGGCGCGCACATGGCCCCCATCCTCAACGCCAAGGGCTACTACAGCGACAACCGCATCATGAAGCGCGCCAACGGCGAGCTGTTCTGGTGCCACGTCACCGGGCGCTCGCTGCACCGCGAGGACCCGCACGCCGCCGGCATCTGGAGTTTCGAGGACCTGAGCGCCCAGCGCCCCGTGAAGGCCGACCTCACGGGCCGCGAGCGCGAGGTGGCGGCGCGGCTGCTGGAGGGCCTGACCTCGAAGGAGATCGGCAAGATCCTCAACATCAGCCACCGCACGGTGGAAATCTACCGCGCGCGGCTCATGCGCAAATACGGCGCATCCACCGCGGCGGACCTGGTGCACAAGCTCGTGGCTTGA
PROTEIN sequence
Length: 180
METDYQLAFELAPVGLVLSRNRAMVDCNRHVCDMFGASRELMVGQSFQILYPSADEYERLGAHMAPILNAKGYYSDNRIMKRANGELFWCHVTGRSLHREDPHAAGIWSFEDLSAQRPVKADLTGREREVAARLLEGLTSKEIGKILNISHRTVEIYRARLMRKYGASTAADLVHKLVA*