ggKbase home page

scnpilot_p_inoc_scaffold_1653_7

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(6122..7177)

Top 3 Functional Annotations

Value Algorithm Source
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein id=12494729 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 352.0
  • Bit_score: 688
  • Evalue 3.60e-195
  • rbh
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 334.0
  • Bit_score: 418
  • Evalue 1.90e-114
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ABD70951.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rh similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 334.0
  • Bit_score: 418
  • Evalue 9.60e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodoferax ferrireducens → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGCTCCGCTCGTGCCTCAACCACCGCATCCTGCGCCTCTGGCTGGTGTTTGCCGCCCTGCAGGGGCTGTCACATTCCGCCCTGGCCGTGGAGACGCTGCGCATTCTTGCGTGGCCCGGCTACGCCGACGCGGATCTGGTCAAGGCATTCGAACAGCGTCACGGGGTGCGTGTGGAAGTCACCCTGGTCGGCAATGACGACATTCTGCGGGAGAAGATGGCGGCCGGAAGCGGCGCCCACTTCGATGTCATCGCCGCCAACACGGCCGAGATGGTGCATTACATCGACAGCGGTCTGATCCAGCCGATCGAGACAGGCAACATTCCCAATCTGCGCCGGCAACTGCCCCGCTTCAGGCCCTTGAGCGCCATCCCCGGTATTACCCGGGCCGGCAGCGTGTACGCCATTCCTTATACCTATTCCGAAATGGGCCTGATCTACGATCGCCGACGCTTCAAGACCGCCCCGGCTTCGTACGCCGACTTGTGGAATCCCCGCTACGCCGGGCAGATACTGCTGTTCGATGGCGGCACGCATAATTTCTCGCTGGCGGCCATGGCGCTCGGACTCGATCCGTTCCGCATTCCGTCCGCAGAATTCCCGCGCGCACTGAAGAAGCTGCTGGCTTTGCGCCGTAATGCACTGGTGTTCTACAGCCTGCCCGAAGAAGCGGCCCGGTTGTTTCGCGAACAGTCCGCTGCCCTGCTGTTTGCCAACTACGGCAGCCAGCAGGTCAAGTTGCTGCGCGACGCCGGGGTCGACATCGGCTATGCCGTCCCGCGCACCGGCGCACTGGCCTGGCTCGATTGCTGGGCCGTCAGCCGCGGAGCGCGTAACAAGGCACTGGCGGAAGCATGGATCAATTACACGCTGGAGCCCGGCGTCAGCCACGCCTTGAGTGTGCGCCAGGGACTGGCCAACACCCTGGAAACCTCCGCCGCCTCGCGCCCCGGCGATCCCCTCATCTGGCTCGAACCGGTAGAAGACGGCGCCCGGCGTACCCGGTTATGGCAGCGCATCCTGTCCGGCGAGCGCGAAGCCCTCCTGCTGCAATGA
PROTEIN sequence
Length: 352
MLRSCLNHRILRLWLVFAALQGLSHSALAVETLRILAWPGYADADLVKAFEQRHGVRVEVTLVGNDDILREKMAAGSGAHFDVIAANTAEMVHYIDSGLIQPIETGNIPNLRRQLPRFRPLSAIPGITRAGSVYAIPYTYSEMGLIYDRRRFKTAPASYADLWNPRYAGQILLFDGGTHNFSLAAMALGLDPFRIPSAEFPRALKKLLALRRNALVFYSLPEEAARLFREQSAALLFANYGSQQVKLLRDAGVDIGYAVPRTGALAWLDCWAVSRGARNKALAEAWINYTLEPGVSHALSVRQGLANTLETSAASRPGDPLIWLEPVEDGARRTRLWQRILSGEREALLLQ*