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scnpilot_p_inoc_scaffold_3802_6

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(3131..4480)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=12495449 bin=THIO_HI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 450.0
  • Bit_score: 868
  • Evalue 4.20e-249
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 446.0
  • Bit_score: 520
  • Evalue 3.50e-145
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABM38844.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 446.0
  • Bit_score: 520
  • Evalue 1.80e-144

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Taxonomy

Polaromonas naphthalenivorans → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGAGCGACTCTTCCGCTGCCACCCCTCCCGCCCCACCGGCGGCATCCACGCCCGCGTCGGGCATCGACCATCTGCTGGGCGACGACCGTCCGCCGGTCTGGTGGCGCCGGCCGACGCTGTGGCTCGGGCTGGCGCTGCTGGTCGCGGCCGGCGCCGGCCTGTGGTGGTGGCAGGGTCGGCAGGCGCAGCGCGCGGCACCGGTCTACGTCACGACGCCCATCGAGCGCGGCGACATCACGCTCAGCGTGACGGCCAACGGCACGCTGAATCCGACCCGCTCGGTCGCCATCGGCAGCGAGCTGTCGGGCACCGTGGCGCGCGTGCTGGTCGACGTCAACGACCGGGTCAAGCGGGGCCAGGTGCTGGTCGAGCTGGACCGCACCAAGTTCGAGGACACGGTGAACCGCTCGCGTGCCGCGCTGGTGGCGGCGCAGGCGGCGCTGGTGCAGAACGAGGCCACGGCGCACGAGGCACGCGCCACGCTCGAACGCTTTGAAGAAGTGGCGCGCCTGTCGGCCGGCCGCGTGCCGTCGGCGACCGAGCTCGACACCGCCCGCGCCACGCTGGCGCGCGCCAACGCCAGTACCGACAACGCGCGCGCGCTGGTCGCGCAGGCGCGCGCCACGCTGTCGACCGACGAGACCAACCTGTCGAAGGCCTCGATCCGCTCGCCGATCGACGGCGTGGTGCTGGCGCGCTCGGTCGACCCCGGCAACGCGGTGGCCGCCTCGCTGCAGGCGGTGACGCTGTTCACGCTGGGCGAAGACCTGACGCGGCTGATCATGGAAGCCGACGTGGACGAGGCCGACGTCGGCGCGGTGCAGCAGGGCCAGCGCGCCAGCTTCACCGTCAGCGCCTACCCGGCACGCCACTATCCGGCGCAGGTCACCCGCGTGGCCTATGGCTCGACCACCACCAACAACGTCGTCACCTACACCACCCAGCTCAGCGTCGACAACGCCGACCTCAGCCTGCGCCCCGGCATGACGGCCACCGCCACCATCGTCTCGACCGAGCGGCGCGGCGTGCTGCTGGTGCCCAACACGGCGCTGCGCTTCACGCCGACCAGCGCCCAGCCGGTCCAGCCTGCTGGCGCGGCGCCCGGTGGCAGCGGCAACCTGGTGTCGAGCATGATGCCGCGCCCGCCGGCCGCCGCCCCGCGCCGCCCGCGCGAGGCCGGCGTCCCAGCGGCGGCCGACCAGCAGCGCCAGATCTGGACTCTGCAGGGCCAGCAGCCGGTGGCCGTCAGCGTGCGCACCGGCATCAGCGACGGGCGCCGCACCGAGGTCAGCAGCCCCGAGTTGCAGCCCGGCACGCCGGTCATCACCGACCAGAGGGCGGCGCAGTGA
PROTEIN sequence
Length: 450
MSDSSAATPPAPPAASTPASGIDHLLGDDRPPVWWRRPTLWLGLALLVAAGAGLWWWQGRQAQRAAPVYVTTPIERGDITLSVTANGTLNPTRSVAIGSELSGTVARVLVDVNDRVKRGQVLVELDRTKFEDTVNRSRAALVAAQAALVQNEATAHEARATLERFEEVARLSAGRVPSATELDTARATLARANASTDNARALVAQARATLSTDETNLSKASIRSPIDGVVLARSVDPGNAVAASLQAVTLFTLGEDLTRLIMEADVDEADVGAVQQGQRASFTVSAYPARHYPAQVTRVAYGSTTTNNVVTYTTQLSVDNADLSLRPGMTATATIVSTERRGVLLVPNTALRFTPTSAQPVQPAGAAPGGSGNLVSSMMPRPPAAAPRRPREAGVPAAADQQRQIWTLQGQQPVAVSVRTGISDGRRTEVSSPELQPGTPVITDQRAAQ*