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scnpilot_p_inoc_scaffold_7037_2

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(471..1268)

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] id=12494773 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 266.0
  • Bit_score: 525
  • Evalue 3.90e-146
  • rbh
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 265.0
  • Bit_score: 480
  • Evalue 2.00e-132
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 265.0
  • Bit_score: 431
  • Evalue 2.20e-118

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGACCGACCGTTACGCCGTATTCGGGCACCCGATCGCCCACTCCAAATCTCCGCAGATCCATACTGCCTTCGCTCGCCAGACCGGCCAGGACATGCGCTACGAAGCCATCCTCGCACCGCTCGACGGCTTTGCGGCGAGCGTGGCGCAGTTCATCGCCGCAGGCGGGCGCGGCGCCAACGTCACCGTCCCGTTCAAGGAAGAAGCCTTCAAACTGGCCAGCCGCCTGAGCCCGCGCGCGCAACGCGCCGGGGCGGTCAACACGCTGGTGTTCGATGCCGACGGCATCCTCGGCGACAACACCGACGGCGCCGGCCTGGTCGCCGATCTCACCCGCAACCTGCGCTGCGCGCTCGCCGGCCAGCGCGTCCTGCTGCTCGGCGCCGGCGGCGCGGCGCGCGGCGTGATCGGGCCGCTGCTCGACCAGCGGCCCACGGCGCTCGTCGTCGCCAACCGCACCGTCCGCCGCGCCGAGGAACTTGCCGGACTGTTCGGCCGCGGCGTCCGCGCCTGCGGGTTCGACGCGCTCGACACTCCGTTCGACCTCGTCGTCAACGCCACCGCCGCCAGCCTCGCCGGCGACCTGCCGCCGCTGTCGCCGCGCGTGTTTACCGCGGACACGCTGGCCTACGACATGATGTACGGGCGCGACACGCCTTTCCTCGGCTTCGCCCGCACGCACGGCGCGCGCACCGCCGACGGCCTCGGCATGCTGGTGGAACAGGCCGCCGAAGCGTTTCATCTGTGGCGCGGCGTGCGCCCCGACACCGCGCCCGTCATCGCGAACCTCCGCACATGA
PROTEIN sequence
Length: 266
MTDRYAVFGHPIAHSKSPQIHTAFARQTGQDMRYEAILAPLDGFAASVAQFIAAGGRGANVTVPFKEEAFKLASRLSPRAQRAGAVNTLVFDADGILGDNTDGAGLVADLTRNLRCALAGQRVLLLGAGGAARGVIGPLLDQRPTALVVANRTVRRAEELAGLFGRGVRACGFDALDTPFDLVVNATAASLAGDLPPLSPRVFTADTLAYDMMYGRDTPFLGFARTHGARTADGLGMLVEQAAEAFHLWRGVRPDTAPVIANLRT*