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scnpilot_p_inoc_scaffold_8850_1

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(3..362)

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system outer membrane lipoprotein id=12494401 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 240
  • Evalue 1.10e-60
outer membrane protein OprM 5 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 120.0
  • Bit_score: 189
  • Evalue 3.30e-45
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 118.0
  • Bit_score: 114
  • Evalue 1.60e-23

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGACTGAACGAAAATCCAAACCCGGGCATAGGCCCCGCTCATTCCAGCTCGCCACGTTCGCCACGCTGGCCGCGCTGGCCGGCTGCTCGCAAATCCCGGCCTATCAGCGCCCGCCCGCGCCTGTCCCGCAGCAGTTCGTCGACAACGCGGCGGACACGCAGGCCACGGCCCTGCCCGACTGGCAGGCCTATTTCACCGATCCGGCGCTGCACGCGCTGATCGAAGCGGCACTCGCCAACAACCGCGACATGCGGATTGCCCTGGCACGCGTCGAAGAGGCACGCGCCCTGGCAGGCGTCGCCCGGGCCGATCGCTTTCCGACGCTGGAAGCCCAGGCGGACGCCAGCCGCACCCGAACA
PROTEIN sequence
Length: 120
MTERKSKPGHRPRSFQLATFATLAALAGCSQIPAYQRPPAPVPQQFVDNAADTQATALPDWQAYFTDPALHALIEAALANNRDMRIALARVEEARALAGVARADRFPTLEAQADASRTRT