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scnpilot_p_inoc_scaffold_10927_1

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(2..427)

Top 3 Functional Annotations

Value Algorithm Source
nsrR; HTH-type transcriptional regulator NsrR id=12493232 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 142.0
  • Bit_score: 287
  • Evalue 9.60e-75
HTH-type transcriptional regulator nsrR {ECO:0000313|EMBL:CBI09185.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 139.0
  • Bit_score: 178
  • Evalue 5.20e-42
HTH-type transcriptional regulator nsrR similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 136.0
  • Bit_score: 175
  • Evalue 1.20e-41

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 426
ATGCGCCTGACCAAGTTCACGGACTATGCCTTGCGGGTCGTCATGTATCTGGCGCGCCATCCGGACGGGCTGGCCACGATTGCCGACATCGCGCGCGAATACGACATTCCTTCCACTCACCTGATGAAAGTGGTGCACCGTCTTGCACAATGCGGCTACATTGTGACCGTGCGCGGAAAGGGGGGCGGCATGCGGCTCGCCCGGGCACCCGCCCTGATCAACGTGGGCGAGCTGGTACGGGATACCGAAGACAACATGGATATCGCCGAATGCTTCAGCGACGAAAATCAGACCTGTCCGATGCTGCCCGCCTGCACGCTCAGATCCATCCTGATCGAAGCTCGCAAAAGCTTTCTGGCCACCCTGGATTTTTATCGCCTGTCGGACATCATGGATCATCCCATGGCATTACATGCCGCCTCATTG
PROTEIN sequence
Length: 142
MRLTKFTDYALRVVMYLARHPDGLATIADIAREYDIPSTHLMKVVHRLAQCGYIVTVRGKGGGMRLARAPALINVGELVRDTEDNMDIAECFSDENQTCPMLPACTLRSILIEARKSFLATLDFYRLSDIMDHPMALHAASL