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scnpilot_p_inoc_scaffold_54_22

Organism: SCNpilot_P_inoc_Bacteroidetes_37_13

near complete RP 52 / 55 BSCG 50 / 51 ASCG 14 / 38
Location: 15688..17370

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1463156 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 571.0
  • Bit_score: 671
  • Evalue 1.00e-189
Transcription termination factor Rho n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLF9_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 582.0
  • Bit_score: 666
  • Evalue 2.30e-188
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 582.0
  • Bit_score: 666
  • Evalue 6.50e-189

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1683
ATGCACAACCTTCAGCAGTTGAATGAAATGATTTTGCCCGAATTACACGAAGTGGCAGAGAAACTAAACATCAGCAATTTTTCATCTTTAGGAAAAGAAGAACTAATTCAAAAAATAATTACTTCGCAAGAAAGTGCAAAGCCGGAAGATGCTTCGGTACAAGAAAAGCCTAAGCGACCACGAGTTCGTAAAGTAACGAAAAAAGAAGTGGTAGAAGAAGGCGAAGCTGAAGCTGAAGCTACTGAAACGCCTGAAGCAGAACCAGTTCAACAAACATTGAATTTAGATGCGCCACAAGTAGAAGAAATAAAAGAACCAAAGCCAGAAAGAACCGAAGCAGCGCCAAGCAGAAGAAGAGAAGACCGCAGAGAAGTGAAACATACAGTAAGCGAAGTGAAGCGCAACGAAGAAGCAGGAGCAGAAAAGCAAGAAGAAAAAGCGGTAGAAAATACTGCTGAAAATGCACCTGAACAACAACAAGGCGAAAATGAACAACGCCAACATAAACACGAAAAATTTCAACAACGACCTAAGCAAGAATTTCGCCCGATTTTTAGCGTAGAAGCAGATGCTGTAATTGAAGGCGAAGGTGTATTGGAAATGATGCCCGATGGCTACGGTTTTTTGCGCAGCAGCGATTATCAATATTTAAGTTCTCCTGATGATATTTATGTATCGCCTTCGCAAGTAAAATTGTTTGGGTTAAGAACAGGAGATACCGTACACGGCACCGTTCGCCCACCAAAAGAAGGAGAGAAGTATTTTGCACTTTTAAAAGTGGATTTGCTCAACGGAAAATCTCCTGGAGAAGTGCGCGACCGCGTTCAGTTCGATTTTCTTACACCACTTTTTCCACAAGAGCGTTTTAGACTTTCTGATAGAAACAGCAACAACATGACATTGCGCATGATTGATTTGTTTTCGCCAATAGGAAAAGGGCAGCGCGGTATGATTGTGGCGCAACCCAAAACCGGTAAAACAACTATTTTAAAAGAAATAGCAAACGGTATTGCGGCAAACCATCCGGAAGCTTATTTGATTGTTTTGCTTATTGATGAACGCCCGGAAGAGGTTACCGATATGGAGCGCAGTGTACGCGCAGAAGTAGTTGCTTCTACTTTTGATGAACCTGCCGATAAACACGTGAAAATTGCCAACATGGTTTTGCAAAAATCGAAGCGATTGGTGGAGTGCGGACACGATGTGGTAATTGTTTTAGACTCTATTACAAGGCTTGCAAGAGCTTACAACACTGTTGCTCCGGCATCAGGAAAAGTACTTAGCGGTGGTGTGGAGGCAAATGCTTTGCAAAAGCCTAAACAGTTTTTTGGTGCTGCCAGAAAAATTGAAAATGGAGGCTCTCTTACCATTATCGCTACTGCTTTAATTGACACAGGTTCCAGAATGGACGAAGTGATTTTTGAAGAATTTAAAGGAACGGGAAATATGGAATTACAGTTAGATAGAAGACTTGCCAATAAACGTATTTATCCTGCTATTGATGTGGTTTCTTCAAGTACAAGAAGAGATGATTTATTGCTCGACCGCGATGTAATGCAACGCATGTGGGTACTGCGTAAGCACTTAGGCGATATGAATGCAGAAGAAAGCATGACTTTCTTGCTTCAACAAATGAAGGGAACAAAGAGCAACGAAGAGTTTCTAATTGGAATGAACGGATAA
PROTEIN sequence
Length: 561
MHNLQQLNEMILPELHEVAEKLNISNFSSLGKEELIQKIITSQESAKPEDASVQEKPKRPRVRKVTKKEVVEEGEAEAEATETPEAEPVQQTLNLDAPQVEEIKEPKPERTEAAPSRRREDRREVKHTVSEVKRNEEAGAEKQEEKAVENTAENAPEQQQGENEQRQHKHEKFQQRPKQEFRPIFSVEADAVIEGEGVLEMMPDGYGFLRSSDYQYLSSPDDIYVSPSQVKLFGLRTGDTVHGTVRPPKEGEKYFALLKVDLLNGKSPGEVRDRVQFDFLTPLFPQERFRLSDRNSNNMTLRMIDLFSPIGKGQRGMIVAQPKTGKTTILKEIANGIAANHPEAYLIVLLIDERPEEVTDMERSVRAEVVASTFDEPADKHVKIANMVLQKSKRLVECGHDVVIVLDSITRLARAYNTVAPASGKVLSGGVEANALQKPKQFFGAARKIENGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELQLDRRLANKRIYPAIDVVSSSTRRDDLLLDRDVMQRMWVLRKHLGDMNAEESMTFLLQQMKGTKSNEEFLIGMNG*