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scnpilot_p_inoc_scaffold_138_143

Organism: SCNpilot_P_inoc_Bacteroidetes_37_13

near complete RP 52 / 55 BSCG 50 / 51 ASCG 14 / 38
Location: 178677..180572

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMB8_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 632.0
  • Bit_score: 852
  • Evalue 2.00e-244
RNA binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 632.0
  • Bit_score: 852
  • Evalue 5.50e-245
RNA binding S1 domain protein {ECO:0000313|EMBL:ACU64023.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 632.0
  • Bit_score: 852
  • Evalue 2.80e-244

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1896
ATGTCAGAAAATACTGAAACAAACGAGCAAACTACACCAGCTCAAGAACAATCAGTAGAAACCACAACAACAAAACCAGTTGCAACCGTTGAACCGGTTACTGCACATGATGATTTTGATTGGAGTGTAGATAAGCGCAATGTTGTAAAATACAATGCACAACAACAAGCTGAATACGATGAACTTTACGGAAAAACAATTCGCACCGTAGAAGATAACCAAATCGTAAAAGGTGCAGTAGTTACCATTACAGACAACGAAGTTATCTTAAACATCGGTTTTAAAAGCGATGGAATGGTGCCACTTAGCGAATTTCGCGATGTGGAAGATTTAAAAGTTGGCGAATCTTATGATGTTTATGTTGTAAGCAAAGAAGACCGCAAAGGACATTTAATTCTTAGCCGCAAGAGCGCTAAAATGCTTAAAGCTTGGGAATTTATCGTTGATGCATTTAGAGATGGAATTATCGTTACCGGCAAAATTACTTCTAAAACCAAAGGCGGCTTAATTGTGAACGTAAACGGTTTAGAAACTTTCTTACCAGGTTCGCAAATTGACGTGAAACCTATCACAGATTACGATGTGTACGTTGGCAAAACAATGGAATTGAAAGTGGTGAAGATAAACGAAGCCATTAAGAATGCAGTAGTGAGCCATAAAGCACTTATAGAAAGCGACCTTGAATCTCAAAGAGAAGAAATTATCAGCAAATTGGAGAAAGGTCAAGTATTGGAAGGTGTTATCAAAAACATCACCGATTTCGGAGCTTTCATAGACTTAGGCGGTTTAGACGGATTGCTTTACATCACCGATATTTCTTGGGGCAGAATTACACATCCAAACGAAGTGTTGGAATTGAACCAAAAATTGAACGTAGTTGTATTAGACTTTGACGATAACAAAAAACGTATTTCGTTAGGTTTAAAACAATTATTAGCTCACCCTTGGGATACTTTGGATAAAGAATTAGAAATTGGAAGCAAAGTAAAAGGCAAAGTAGTAAATATTGAAGACTACGGTGCATTCCTTGAAATTACTCCGGGCGTTGAAGGTTTAGTCCACGTAAGTGAAATTAGCTGGAGTGCTTCTCCGGTAAACAGCCACGACTTCTTTAAATTAGGTGCAGAACACGAAGCTATCGTGATGACACTTGACCGCGAAGAGCGCAAAATGAGCCTTTCTATTAAGCGCTTAACCGATGATCCTTGGCAAAAAGTTGAAGAGAAATATCCTGTAGGCAGCAAGCACACCGGTATTGTTCGCAACTTAACGCCTTACGGTGTTTTTGTTGAATTAGATGAATTTATCGGAGGAATGGTTCACATTAGCGACCTTAGCTGGACTAAGCGTTTCAACCACCCAAGTGAATTTACTAAAGTTGGAAACGAACTAGAAGTTGTAGTTCTTGAAATGGATAAAGAGAACAGAAAACTTAACTTAGGACACCGCCAAATTGAAGAAGATCCTTGGAATACTTTTGAAGATGTATTCCCAGTAAGTTCGGTTCACGAAGCTACTGTAATGAGTATTGACGATAAAGGCGCTATGGTTCTTTTGCCTTACGGTTTAGAAGCTTTCGCTCCTAAAAAACACCTTTCAAAAGAAGATGGCGGTATTTTAGCAGTAGATGAAAAAGCTGAATTTAGAGTAATCGAATTCAACCGCAACGATAAGCGTATCTTAGTTTCTCACGCCCGCATTTGGGAAGAAAAACAAAAAGAAGGCAAAGAAGTAGAAAAGAACGAGAAAAAAGCTGAAGTTGAACGCACTAAAAAAGCAGTGAAAAACTTACAGCAAAAAGTTGAAAAAGCTACTTTGGGCGACTTAGGTGTTCTTAGCCAACTAAAAGATAAAATGGAAGGAAAAGAAGCCAAGGATAATAAAGACAACGAATAG
PROTEIN sequence
Length: 632
MSENTETNEQTTPAQEQSVETTTTKPVATVEPVTAHDDFDWSVDKRNVVKYNAQQQAEYDELYGKTIRTVEDNQIVKGAVVTITDNEVILNIGFKSDGMVPLSEFRDVEDLKVGESYDVYVVSKEDRKGHLILSRKSAKMLKAWEFIVDAFRDGIIVTGKITSKTKGGLIVNVNGLETFLPGSQIDVKPITDYDVYVGKTMELKVVKINEAIKNAVVSHKALIESDLESQREEIISKLEKGQVLEGVIKNITDFGAFIDLGGLDGLLYITDISWGRITHPNEVLELNQKLNVVVLDFDDNKKRISLGLKQLLAHPWDTLDKELEIGSKVKGKVVNIEDYGAFLEITPGVEGLVHVSEISWSASPVNSHDFFKLGAEHEAIVMTLDREERKMSLSIKRLTDDPWQKVEEKYPVGSKHTGIVRNLTPYGVFVELDEFIGGMVHISDLSWTKRFNHPSEFTKVGNELEVVVLEMDKENRKLNLGHRQIEEDPWNTFEDVFPVSSVHEATVMSIDDKGAMVLLPYGLEAFAPKKHLSKEDGGILAVDEKAEFRVIEFNRNDKRILVSHARIWEEKQKEGKEVEKNEKKAEVERTKKAVKNLQQKVEKATLGDLGVLSQLKDKMEGKEAKDNKDNE*