ggKbase home page

scnpilot_p_inoc_scaffold_375_20

Organism: SCNpilot_P_inoc_Planctomycetales_70_10

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 29186..29758

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ22_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 177.0
  • Bit_score: 237
  • Evalue 1.20e-59
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 177.0
  • Bit_score: 237
  • Evalue 3.30e-60
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA30910.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 177.0
  • Bit_score: 237
  • Evalue 1.60e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGTACGGCAACCCGTCCTCCATATCGAGCACGCCGATGGCAGGTGAACGCGACCCGGACGGCGACGCGTGGGTGCGCGACGCGGTCTCCCGATTCGAGGGGCCCCTGTCGCTCTACGCGCGACGCCTCCTGAACGACGCCGAGGCGGCCCGCGACGTGGTGCAGGACGTCTTCCTGCGCCTCTGCGCCCAGCCCCGCGGCGACGTCGACGGCCACCTGGCCGAATGGCTGTTCACGGTCTGCCGGAATCGGGCGCTGGACGTCCTGCGGAAGGAGCATCGCATGACCCGATTGCACGACGAGCAAGTCGACCGCTGCCTCAGCCCGGCCCCCGGGCCGCACGACGTCGCCGAGGTCCACGACCTGGGGGCGCGCGTGCTGTCGCTCCTGGACACTTTACCCCCCAACCAGCGCGAGGTGATCCGCCTGAAGTTCCAGAACGGTTTCTCCTACCAGGAGATCAGCCGGATCAGCGGCCACAGCGTCTCCAACGTCGGCTACCTGATCCACGCCGGGATCAAGACCCTCCGGGGCCGCCTGTTCGACAACCGCACCGCCGGCGCGGGCGCCTGA
PROTEIN sequence
Length: 191
MYGNPSSISSTPMAGERDPDGDAWVRDAVSRFEGPLSLYARRLLNDAEAARDVVQDVFLRLCAQPRGDVDGHLAEWLFTVCRNRALDVLRKEHRMTRLHDEQVDRCLSPAPGPHDVAEVHDLGARVLSLLDTLPPNQREVIRLKFQNGFSYQEISRISGHSVSNVGYLIHAGIKTLRGRLFDNRTAGAGA*