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scnpilot_p_inoc_scaffold_753_11

Organism: SCNpilot_P_inoc_Planctomycetales_70_10

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(10261..11940)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7W5_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 559.0
  • Bit_score: 833
  • Evalue 1.40e-238
  • rbh
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 559.0
  • Bit_score: 833
  • Evalue 4.00e-239
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA24945.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 559.0
  • Bit_score: 833
  • Evalue 2.00e-238

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1680
ATGGGCAAGACGTATTGTCACCCGGCGATGAAGCAGCTCAAGGATCAGCAGGCCCGTTACGCCCCTCGCGAACGGCGGCTGGAGCAGTTGGAGCGGGCCGAGCAGCTCCTCGGCGAGATCGACCGGGCCAAGCGATACCCCTACGAATACCTCTGCTTCCGGATCACCGGGTTCCGGCCGGACAACTGGTCGGCCCTGATGATCGAGGGGGAGGAGGCCCGCCGCGACCTGCGGCAGTTCGTGGAGGACCTCTCGGCCACGGTCCGGCAGCCGGTGGAGCAGGCGGCCGAGCCGGTGCTCACGGTCGGCGAGGTGAGCAAGAAATACAACGTCTCCACCCGCACGGTGACGCGGTGGCGGCGGCAGGGCCTGGTGTCGCGTCGGTTCGTGATCGACGGCAGGGCCAAGGTGGGGTTCCTGGAGAGCAGCCTGCAACGGTTCGTGGCCGAGCATCGCGGCCAGGTGGAACGGGGCTCGAAGTTTCGCCAACTGACCGACGCGGAGAAGGATGAGATCATCCGCCGCGCCCGTCGCATGTCGCAATTTCGGTCGGGCGAGGTGGGCCTGATCGAAGTCGCGCGGAGGATCGCTAGGAAAATGGCACGCTCGACCGAGACCGTCAGACTGACCCTCAAGGCTTACGACCGCGAGCACCCGGACCGGGCCATCTTCGGCCCCTCGACGGCCCCCCTCGACGACGACGCCAAGGCCCAGATCTACCTCCGCCATCGCATGGGCGTCTCGGCCGAGAACCTCGCCGTCGAGTTCCGACGCACCCGCTCCAGCGTCTATCGCATCATCAACGAGGTCCGCGCGAACCGCATCCTCGAGACCAAGCTGGAATTCATCGGCAACGAGACCTTCGACGACCCCAAGTCCAGGTCCGTCATCATGGCCCCGCTCCCCGCGCCGGCCGACGGCAAGGCCCCGCGCCGGCCCAAGGCCCCCAAGGGGCTGCCGCCGTATCTCGCCAGCCTGTATGAAGTCCCGCTCCTCGACCGCGAGCAGGAAGCCCACCTGTTCCGCCAGATGAACTACCTGAAGTCCCAGGCCGTCAAGCTCCGCGAGAAGCTCGACCCGGCCAAGGCCAAGACCTCCGAGCTGGACAAGATCGAGGATCTCCAGGAGCAGGCCCTGGCCGTCAAGAACCAGATCATCCGCGCCAACCTGCGGCTGGTCGTCTCGATCGCCAAGCGCCACGTCGGCCCGTCGAACAACTTCTTCGAGCTGGTCTCCGACGGCAACATGAGCCTCATCCGAGCCGTCGAGAAGTTCGACTACGCCCGCGGCAACAAGTTCAGCACCTATGCCTCCTGGGCGATCATGAAGAACTACGCCCGGACCATCCCGGAGGAGAACTATCGCCGCGACCGGTTCGTCACCGGTCACGAGGAGATGTTCGAAGCCGCCGCCGACAACCGCATCGACGAGCACGAGTATGAGAGCGCCCTGAAGCGCATGCAGGAGGCCATCCGCAGCATGCTCGACCGCCTGGACGATCGCGAGAAGCTGATCATCACCAGCCGGTTCGGCCTCAGCGGGGCCTCCGAGCGCACCCTGGAGCAGCTCGGCCGCGAGCTGGGCATCACCAAGGAGCGCGTCCGCCAGATCGAATCCCGGGGCGTCGACAAGCTCCGCCGCATCGCCGGCGAGCAGGAACTCGACCTGCCGATGCTCTGA
PROTEIN sequence
Length: 560
MGKTYCHPAMKQLKDQQARYAPRERRLEQLERAEQLLGEIDRAKRYPYEYLCFRITGFRPDNWSALMIEGEEARRDLRQFVEDLSATVRQPVEQAAEPVLTVGEVSKKYNVSTRTVTRWRRQGLVSRRFVIDGRAKVGFLESSLQRFVAEHRGQVERGSKFRQLTDAEKDEIIRRARRMSQFRSGEVGLIEVARRIARKMARSTETVRLTLKAYDREHPDRAIFGPSTAPLDDDAKAQIYLRHRMGVSAENLAVEFRRTRSSVYRIINEVRANRILETKLEFIGNETFDDPKSRSVIMAPLPAPADGKAPRRPKAPKGLPPYLASLYEVPLLDREQEAHLFRQMNYLKSQAVKLREKLDPAKAKTSELDKIEDLQEQALAVKNQIIRANLRLVVSIAKRHVGPSNNFFELVSDGNMSLIRAVEKFDYARGNKFSTYASWAIMKNYARTIPEENYRRDRFVTGHEEMFEAAADNRIDEHEYESALKRMQEAIRSMLDRLDDREKLIITSRFGLSGASERTLEQLGRELGITKERVRQIESRGVDKLRRIAGEQELDLPML*