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scnpilot_p_inoc_scaffold_119

Search features with annotation key words

Displaying items 61-90 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_119_61
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59658..63272
DNA (3615bp) protein (1205aa)
Type IV pilus assembly protein PilY1 n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WII8_DELAC rbh
FG-GAP repeat-containing protein; K02674 type IV pilus assembly protein PilY1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PilC domain-containing protein
scnpilot_p_inoc_scaffold_119_62
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63287..63745
DNA (459bp) protein (153aa)
Fimbrial protein pilin n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1Y4_9BURK
fimbrial protein pilin; K02655 type IV pilus assembly protein PilE Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
fimbrial protein pilin
scnpilot_p_inoc_scaffold_119_63
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63777..64907
DNA (1131bp) protein (377aa)
riboflavin biosynthesis protein ribd (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
riboflavin biosynthesis protein ribd (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1Y3_9BURK
scnpilot_p_inoc_scaffold_119_64
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64928..65551
DNA (624bp) protein (208aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=12553922 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
riboflavin synthase subunit alpha (EC:2.5.1.9)
scnpilot_p_inoc_scaffold_119_65
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65732..67660
DNA (1929bp) protein (643aa)
PpiC-type peptidyl-prolyl cis-trans isomerase id=12549896 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PpiC-type peptidyl-prolyl cis-trans isomerase
scnpilot_p_inoc_scaffold_119_66
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67963..69195)
DNA (1233bp) protein (411aa)
acetyl-CoA acetyltransferase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E4BF rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ENZ83510.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
acetyl-CoA acetyltransferase
scnpilot_p_inoc_scaffold_119_67
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69210..70865)
DNA (1656bp) protein (552aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GNZ3_9PROT rbh
putative O-succinylbenzoate-CoA ligase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_119_68
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70907..71716)
DNA (810bp) protein (270aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MBC7_9PROT
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KEO58949.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" s
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_119_69
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71745..72530)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6J8_9BACI
3-hydroxy-2-methylbutyryl-CoA dehydrogenase
Tax=BJP_IG2069_Syntrophobacterales_46_30
scnpilot_p_inoc_scaffold_119_70
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72571..73815)
DNA (1245bp) protein (415aa)
Branched chain amino acid ABC transporter substrate-binding protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VXE8_9ALTE rbh
Branched chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENO14935.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadacea
branched chain amino acid ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_119_71
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73988..74644
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBQ3_BORPD
TetR family transcriptional regulator
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:CAP41468.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_p_inoc_scaffold_119_72
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74931..75203)
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T243_ACIDE
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
histone family protein DNA-binding protein
scnpilot_p_inoc_scaffold_119_73
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75491..76060)
DNA (570bp) protein (190aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2Z4_9BURK
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EHL21069.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
scnpilot_p_inoc_scaffold_119_74
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76106..78067)
DNA (1962bp) protein (654aa)
excinuclease abc, c subunit; K03703 excinuclease ABC subunit C id=12549537 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
excinuclease abc, c subunit; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
excinuclease ABC subunit C
scnpilot_p_inoc_scaffold_119_75
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78115..79260
DNA (1146bp) protein (382aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12549901 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
scnpilot_p_inoc_scaffold_119_76
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79408..79962
DNA (555bp) protein (185aa)
Elongation factor P n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3B9_9BURK
elongation factor P Tax=GWA2_Burkholderiales_64_37_curated
elongation factor P
scnpilot_p_inoc_scaffold_119_77
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80111..81502)
DNA (1392bp) protein (464aa)
MiaB-like tRNA modifying enzyme YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
MiaB-like tRNA modifying enzyme YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] id=12549903 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rimO; ribosomal protein S12 methylthiotransferase
scnpilot_p_inoc_scaffold_119_78
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81528..82064)
DNA (537bp) protein (179aa)
polyhydroxyalkonate synthesis repressor, PhaR id=12549541 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
polyhydroxyalkonate synthesis repressor, PhaR Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
polyhydroxyalkonate synthesis repressor PhaR
scnpilot_p_inoc_scaffold_119_79
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82235..83656
DNA (1422bp) protein (474aa)
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase (EC:2.3.1.19)
Putative phosphate acetyltransferase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RG55_9RHOO rbh
Putative phosphate acetyltransferase {ECO:0000313|EMBL:EGK70543.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Met
scnpilot_p_inoc_scaffold_119_80
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83668..84855
DNA (1188bp) protein (396aa)
acetate kinase (EC:2.7.2.1)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=338969 species="Bacteria; Proteobacteria; Betaprot
Acetate kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U67_RHOFD rbh
scnpilot_p_inoc_scaffold_119_81
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84886..85146)
DNA (261bp) protein (87aa)
UPI0003D3B89B related cluster n=1 Tax=unknown RepID=UPI0003D3B89B
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
infA; translation initiation factor if-1
scnpilot_p_inoc_scaffold_119_82
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85176..85430)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA21_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33824.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
scnpilot_p_inoc_scaffold_119_83
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85802..88033)
DNA (2232bp) protein (744aa)
(p)ppGpp synthetase I SpoT/RelA id=12549905 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
(p)ppGpp synthetase I SpoT/RelA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
(p)ppGpp synthetase I SpoT/RelA
scnpilot_p_inoc_scaffold_119_84
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88030..88977)
DNA (948bp) protein (316aa)
Alpha/beta hydrolase fold protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I115_9BURK
alpha/beta fold family hydrolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
alpha/beta fold family hydrolase
scnpilot_p_inoc_scaffold_119_85
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89045..89833
DNA (789bp) protein (263aa)
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30) id=12549917 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
scnpilot_p_inoc_scaffold_119_86
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89889..90506)
DNA (618bp) protein (206aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12549918 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_119_87
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90755..91480
DNA (726bp) protein (242aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZJ4_ALIDB
oxidoreductase fad/nad(p)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ADU98541.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" s
scnpilot_p_inoc_scaffold_119_88
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91488..92189
DNA (702bp) protein (234aa)
Putative ECF-family RNA polymerase sigma factor n=4 Tax=Bordetella RepID=K4QEG6_BORBO
RNA polymerase sigma factor
Putative ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CCN22541.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sourc
scnpilot_p_inoc_scaffold_119_89
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92256..92987
DNA (732bp) protein (244aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I, FolE {ECO:0000313|EMBL:CBL46009.1}; EC=3.5.4.16 {ECO:0000313|EMBL:CBL46009.1};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacteriu
GTP cyclohydrolase I, FolE n=1 Tax=gamma proteobacterium HdN1 RepID=E1VMG7_9GAMM rbh
scnpilot_p_inoc_scaffold_119_90
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93125..93859
DNA (735bp) protein (245aa)
ompR; osmolarity response regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR id=12549919 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ompR; osmolarity response regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
winged helix family two component transcriptional regulator
Displaying items 61-90 of 248 in total

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