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scnpilot_p_inoc_scaffold_119

Search features with annotation key words

Displaying items 151-180 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_119_151
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155912..157915)
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000379A2CF rbh
Putative secreted protein Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
transglutaminase
scnpilot_p_inoc_scaffold_119_152
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157932..158552)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI000367A394
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_119_153
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158637..159527)
DNA (891bp) protein (297aa)
rard protein, dmt superfamily transporter; K05786 chloramphenicol-sensitive protein RarD id=12551075 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria rbh
rard protein, dmt superfamily transporter; K05786 chloramphenicol-sensitive protein RarD Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
transporter DMT superfamily protein
scnpilot_p_inoc_scaffold_119_154
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159591..160520)
DNA (930bp) protein (310aa)
phosphoesterase, DHHA1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
phosphoesterase, DHHA1 id=12551081 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
phosphoesterase, DHHA1
scnpilot_p_inoc_scaffold_119_155
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160568..160903)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W8B0_ACISJ
ankyrin
Ankyrin {ECO:0000313|EMBL:ACM32997.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaph
scnpilot_p_inoc_scaffold_119_156
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160997..161788
DNA (792bp) protein (264aa)
tRNA pseudouridine synthase C n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C345B
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:GAD23438.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
pseudouridine synthase
scnpilot_p_inoc_scaffold_119_157
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161801..162754)
DNA (954bp) protein (318aa)
Ribosome biogenesis GTPase A n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHA9_ACIET rbh
GTP-binding protein, HSR1-like
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebre
scnpilot_p_inoc_scaffold_119_158
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162818..163711)
DNA (894bp) protein (298aa)
ubia prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] id=12551093 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ubia prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ubia prenyltransferase
scnpilot_p_inoc_scaffold_119_159
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163756..165288)
DNA (1533bp) protein (511aa)
glutamate/cysteine ligase (EC:6.3.2.2)
glutamate--cysteine ligase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glutamate--cysteine ligase id=12551097 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_119_160
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165409..166317)
DNA (909bp) protein (303aa)
short-chain dehydrogenase/reductase sdr id=12551098 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
short-chain dehydrogenase/reductase sdr Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
short-chain dehydrogenase/reductase sdr
scnpilot_p_inoc_scaffold_119_161
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166460..167344
DNA (885bp) protein (295aa)
NUDIX hydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ40_ALIDB rbh
nudix hydrolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
nudix hydrolase
scnpilot_p_inoc_scaffold_119_162
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167356..168285)
DNA (930bp) protein (310aa)
branched-chain amino acid transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E1467 rbh
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:GAD21350.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
class IV aminotransferase
scnpilot_p_inoc_scaffold_119_163
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168643..168945
DNA (303bp) protein (101aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ferredoxin id=12551102 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ferredoxin
scnpilot_p_inoc_scaffold_119_164
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169176..170297
DNA (1122bp) protein (374aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C185_9BURK
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:EHL21740.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="
3,4-dihydroxy-2-butanone 4-phosphate synthase
scnpilot_p_inoc_scaffold_119_165
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170572..171036
DNA (465bp) protein (155aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=12551104 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase
scnpilot_p_inoc_scaffold_119_166
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171033..171560
DNA (528bp) protein (176aa)
N utilization substance protein B homolog n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAI5_ALIDK
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=596154 species="Bacteria; Prote
scnpilot_p_inoc_scaffold_119_167
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171557..172741
DNA (1185bp) protein (395aa)
aminotransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
aminotransferase id=12551106 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
aminotransferase
scnpilot_p_inoc_scaffold_119_168
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172759..173178
DNA (420bp) protein (140aa)
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] id=12551107 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tol-pal system-associated acyl-CoA thioesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tol-pal system-associated acyl-CoA thioesterase
scnpilot_p_inoc_scaffold_119_169
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173175..173879
DNA (705bp) protein (235aa)
protein TolQ; K03562 biopolymer transport protein TolQ id=12551108 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
protein TolQ; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
protein TolQ rbh
scnpilot_p_inoc_scaffold_119_170
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173898..174323
DNA (426bp) protein (142aa)
biopolymer transport protein ExbD/TolR id=12551109 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_119_171
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174340..175308
DNA (969bp) protein (323aa)
Cell division and transport-associated protein TolA n=2 Tax=Acidovorax RepID=A1W9I9_ACISJ
protein tola
Protein TolA {ECO:0000313|EMBL:ACM33701.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (
scnpilot_p_inoc_scaffold_119_172
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175384..176748
DNA (1365bp) protein (455aa)
Peptidase U32 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9C4_ACIDE
Peptidase U32 {ECO:0000313|EMBL:EER58922.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peptidase u32
scnpilot_p_inoc_scaffold_119_173
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176899..177225)
DNA (327bp) protein (109aa)
sulfite dehydrogenase (cytochrome) subunit SorB (EC:1.8.2.1)
Sulfite dehydrogenase (Cytochrome) subunit SorB {ECO:0000313|EMBL:ABM40290.1}; EC=1.8.2.1 {ECO:0000313|EMBL:ABM40290.1};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteob
Sulfite dehydrogenase (Cytochrome) subunit SorB n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W215_ACISJ
scnpilot_p_inoc_scaffold_119_174
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177320..178534)
DNA (1215bp) protein (405aa)
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein (EC:1.8.2.1) rbh
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein {ECO:0000313|EMBL:ABM40291.1}; EC=1.8.2.1 {ECO:0000313|EMBL:ABM40291.1};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria;
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W216_ACISJ rbh
scnpilot_p_inoc_scaffold_119_175
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178599..179183)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYU4_DELSC rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF87100.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (str
scnpilot_p_inoc_scaffold_119_176
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179180..179719)
DNA (540bp) protein (180aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W218_ACISJ
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABM40293.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
scnpilot_p_inoc_scaffold_119_177
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179937..182528)
DNA (2592bp) protein (864aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRN
Aconitate hydratase 2 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBN6_ACIET
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
scnpilot_p_inoc_scaffold_119_178
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182596..183207)
DNA (612bp) protein (204aa)
hypothetical protein id=12551119 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_119_179
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183240..184301)
DNA (1062bp) protein (354aa)
HpcH/HpaI aldolase id=12551120 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
HpcH/HpaI aldolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
HpcH/HpaI aldolase
scnpilot_p_inoc_scaffold_119_180
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184311..185297)
DNA (987bp) protein (329aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=80878 species="Bacteria; Pro
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] id=12551121 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
malate dehydrogenase
Displaying items 151-180 of 248 in total

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