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scnpilot_p_inoc_scaffold_254

Search features with annotation key words

Displaying items 31-60 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_254_31
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29200..32511)
DNA (3312bp) protein (1104aa)
Type I site-specific deoxyribonuclease, HsdR family protein {ECO:0000313|EMBL:CDG85894.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CDG85894.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacter
hsdR; type I site-specific deoxyribonuclease, HsdR family protein (EC:3.1.21.3) rbh
DEAD/DEAH box helicase n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003621501 rbh
scnpilot_p_inoc_scaffold_254_32
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(32508..33740)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000366F64A
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ABO34927.1}; TaxID=402880 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" so
scnpilot_p_inoc_scaffold_254_33
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33743..34888)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GN70_XANCT rbh
Uncharacterized protein {ECO:0000313|EMBL:ELQ07355.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas trans
virulence protein-like protein
scnpilot_p_inoc_scaffold_254_34
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34881..36407)
DNA (1527bp) protein (509aa)
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:CDG85741.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CDG85741.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
type I restriction-modification protein subunit M n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037843B4 rbh
scnpilot_p_inoc_scaffold_254_35
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36429..37034)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000369D14C rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89262.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_254_36
unknown

Not on your lists

comp(37081..37944)
DNA (864bp) protein (288aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_254_37
unknown

Not on your lists

comp(37949..38665)
DNA (717bp) protein (239aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_254_38
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39045..39266
DNA (222bp) protein (74aa)
DNA binding domain, excisionase family n=2 Tax=Ralstonia RepID=E2SYM5_9RALS
Excisionase {ECO:0000313|EMBL:KIE29974.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
Helix-turn-helix domain protein
scnpilot_p_inoc_scaffold_254_39
unknown

Not on your lists

39442..40473
DNA (1032bp) protein (344aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_254_40
unknown

Not on your lists

comp(40525..41700)
DNA (1176bp) protein (392aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_254_41
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42425..43429)
DNA (1005bp) protein (335aa)
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=12549923 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hrcA; heat-inducible transcription repressor
scnpilot_p_inoc_scaffold_254_42
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43458..44354
DNA (897bp) protein (299aa)
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23) id=12549938 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23)
scnpilot_p_inoc_scaffold_254_43
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44357..46015
DNA (1659bp) protein (553aa)
DNA repair protein RecN Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
DNA repair protein RecN id=12549939 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
DNA repair protein RecN
scnpilot_p_inoc_scaffold_254_44
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46018..46878
DNA (861bp) protein (287aa)
glmZ(sRNA)-inactivating NTPase id=12549940 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glmZ(sRNA)-inactivating NTPase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glmZ(sRNA)-inactivating NTPase
scnpilot_p_inoc_scaffold_254_45
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46888..47925)
DNA (1038bp) protein (346aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific DNA-adenine glycosylase {ECO:0000313|EMBL:ABM41143.1}; EC=3.2.2.- {ECO:0000313|EMBL:ABM41143.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
A/G-specific DNA-adenine glycosylase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4G8_ACISJ
scnpilot_p_inoc_scaffold_254_46
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47922..49886)
DNA (1965bp) protein (655aa)
hypothetical protein id=12549942 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_254_47
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50008..50823)
DNA (816bp) protein (272aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
formamidopyrimidine-DNA glycosylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F6736
scnpilot_p_inoc_scaffold_254_48
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50846..52627
DNA (1782bp) protein (594aa)
TPR repeat-containing protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4G5_ACISJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_254_49
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52624..53127
DNA (504bp) protein (168aa)
Outer membrane lipoprotein LolB n=2 Tax=Alicycliphilus denitrificans RepID=E8U0Z8_ALIDB
molecular chaperone LolB
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.
scnpilot_p_inoc_scaffold_254_50
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53152..54015
DNA (864bp) protein (288aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) id=12549946 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
scnpilot_p_inoc_scaffold_254_51
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54178..55152
DNA (975bp) protein (325aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV81_9BURK
scnpilot_p_inoc_scaffold_254_52
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55244..55873
DNA (630bp) protein (210aa)
ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=12549949 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
50S ribosomal protein L25/general stress protein Ctc
scnpilot_p_inoc_scaffold_254_53
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55958..56581
DNA (624bp) protein (208aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29) id=12549950 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
peptidyl-tRNA hydrolase (EC:3.1.1.29) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
scnpilot_p_inoc_scaffold_254_54
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56640..56903)
DNA (264bp) protein (88aa)
4Fe-4S ferredoxin id=12549951 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
4Fe-4S ferredoxin
scnpilot_p_inoc_scaffold_254_55
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57108..57752)
DNA (645bp) protein (215aa)
lysine exporter protein LysE/YggA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
lysine exporter protein LysE/YggA id=12549954 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
lysine exporter protein LysE/YggA
scnpilot_p_inoc_scaffold_254_56
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57834..58073)
DNA (240bp) protein (80aa)
hypothetical protein id=12549955 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_254_57
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58081..58503)
DNA (423bp) protein (141aa)
Sensor of blue-light using FAD n=1 Tax=Acidovorax sp. CF316 RepID=J1EI97_9BURK
Sensor of blue-light using FAD {ECO:0000313|EMBL:EJE51949.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
bluf domain-containing protein
scnpilot_p_inoc_scaffold_254_58
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58511..59233)
DNA (723bp) protein (241aa)
GTP cyclohydrolase I {ECO:0000313|EMBL:EER58392.1}; EC=3.5.4.16 {ECO:0000313|EMBL:EER58392.1};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAV8_ACIDE
scnpilot_p_inoc_scaffold_254_59
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59323..60543)
DNA (1221bp) protein (407aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=1268622 species="Bacteria; Proteoba
phospholipase D n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003740D0A rbh
phospholipase d/transphosphatidylase
scnpilot_p_inoc_scaffold_254_60
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60583..61350)
DNA (768bp) protein (256aa)
Endonuclease/exonuclease/phosphatase n=2 Tax=Acidovorax RepID=A1W4E4_ACISJ rbh
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACM32285.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
Displaying items 31-60 of 173 in total

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