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scnpilot_p_inoc_scaffold_323

Search features with annotation key words

Displaying items 31-60 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_323_31
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36321..38630
DNA (2310bp) protein (770aa)
xanthine dehydrogenase, molybdopterin-binding subunit (EC:1.17.1.4); K13482 xanthine dehydrogenase large subunit [EC:1.17.1.4] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
xanthine dehydrogenase, molybdopterin-binding subunit (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAF4_ACISJ
scnpilot_p_inoc_scaffold_323_32
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38724..40853)
DNA (2130bp) protein (710aa)
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PAS/PAC sensor-containing diguanylate cyclase id=12551869 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_p_inoc_scaffold_323_33
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41013..41636)
DNA (624bp) protein (208aa)
cyclic nucleotide-binding protein id=12551466 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
cyclic nucleotide-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
putative Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_323_34
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41906..43774
DNA (1869bp) protein (623aa)
diguanylate cyclase/phosphodiesterase id=12551465 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_323_35
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43782..45206)
DNA (1425bp) protein (475aa)
RND efflux system outer membrane lipoprotein NodT Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RND efflux system outer membrane lipoprotein NodT id=12551464 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RND efflux system outer membrane lipoprotein NodT
scnpilot_p_inoc_scaffold_323_36
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45199..48357)
DNA (3159bp) protein (1053aa)
hydrophobe/amphiphile efflux-1 (HAE1) family protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
hydrophobe/amphiphile efflux-1 HAE1 protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=5079716 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hydrophobe/amphiphile efflux-1 (HAE1) family protein
scnpilot_p_inoc_scaffold_323_37
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48370..49683)
DNA (1314bp) protein (438aa)
RND family efflux transporter, MFP subunit n=1 Tax=Polaromonas sp. CF318 RepID=J2TUN9_9BURK rbh
RND family efflux transporter mfp subunit; K03585 membrane fusion protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_323_38
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49846..50478
DNA (633bp) protein (211aa)
acrR; transcriptional regulator AcrR; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor id=12551860 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_323_39
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50498..51733)
DNA (1236bp) protein (412aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI00023769D7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_323_40
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51914..52729)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0V9_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_323_41
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52774..53304
DNA (531bp) protein (177aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12551454 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_323_42
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53337..53687)
DNA (351bp) protein (117aa)
5-hydroxyisourate hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVF6_9BURK
hydroxyisourate hydrolase
hydroxyisourate hydrolase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_323_43
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53783..54466
DNA (684bp) protein (228aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J2L3R9_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:KJA10205.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_323_44
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54477..55457
DNA (981bp) protein (327aa)
urate catabolism protein (EC:3.5.1.41)
Urate catabolism protein {ECO:0000313|EMBL:ACM32514.1}; EC=3.5.1.41 {ECO:0000313|EMBL:ACM32514.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Urate catabolism protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFF1_ACIET
scnpilot_p_inoc_scaffold_323_45
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55524..57296
DNA (1773bp) protein (591aa)
Bifunctional OHCU decarboxylase/allantoate amidohydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0V6_9BURK
bifunctional OHCU decarboxylase/allantoate amidohydrolase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
bifunctional OHCU decarboxylase/allantoate amidohydrolase
scnpilot_p_inoc_scaffold_323_46
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57303..58556
DNA (1254bp) protein (418aa)
Peptidase dimerization domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXR3_ALIDB
peptidase dimerization domain-containing protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:ADV00831.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
scnpilot_p_inoc_scaffold_323_47
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58845..60332
DNA (1488bp) protein (496aa)
Xanthine permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0V2_9BURK
xanthine permease Tax=GWA2_Burkholderiales_64_37_curated
xanthine permease
scnpilot_p_inoc_scaffold_323_48
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60505..62811
DNA (2307bp) protein (769aa)
malic enzyme (EC:1.1.1.39) rbh
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase {ECO:0000313|EMBL:ABM41345.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ABM41345.1};; EC=2.3.1.8 {ECO:0000313|EMBL:ABM4
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W520_ACISJ rbh
scnpilot_p_inoc_scaffold_323_49
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62935..63999)
DNA (1065bp) protein (355aa)
adenylate/guanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
adenylate/guanylate cyclase id=12551849 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
adenylate/guanylate cyclase
scnpilot_p_inoc_scaffold_323_50
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


64314..64547
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=4 Tax=Delftia RepID=RL28_DELAS
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
scnpilot_p_inoc_scaffold_323_51
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


64559..64729
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=2 Tax=Acidovorax RepID=RL33_ACIET
rpmG; 50S ribosomal protein l33
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (
scnpilot_p_inoc_scaffold_323_52
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64821..65501)
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein id=12553146 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
scnpilot_p_inoc_scaffold_323_53
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65588..66679)
DNA (1092bp) protein (364aa)
ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
id=12553145 bin=BDI tax=BDI organism_group=Betaproteobacteria rbh
ATP-binding protein
scnpilot_p_inoc_scaffold_323_54
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66676..67362)
DNA (687bp) protein (229aa)
Fis family two component transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Fis family two component transcriptional regulator id=12553144 bin=BDI species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Fis family two component transcriptional regulator
scnpilot_p_inoc_scaffold_323_55
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67355..67615)
DNA (261bp) protein (87aa)
id=12553143 bin=BDI tax=BDI organism_group=Betaproteobacteria
id=12553143 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_56
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67615..68745)
DNA (1131bp) protein (377aa)
id=12553142 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_323_57
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68831..69703)
DNA (873bp) protein (291aa)
hypothetical protein id=12553141 bin=BDI species=Gallionella sp. SCGC AAA018-N21 genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_323_58
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69738..70220)
DNA (483bp) protein (161aa)
id=12553140 bin=BDI tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_p_inoc_scaffold_323_59
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70242..70847)
DNA (606bp) protein (202aa)
id=12553139 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
id=12553139 bin=BDI tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_323_60
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70844..72298)
DNA (1455bp) protein (485aa)
id=12553138 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
id=12553138 bin=BDI tax=BDI organism_group=Betaproteobacteria rbh
Displaying items 31-60 of 92 in total

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