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scnpilot_p_inoc_scaffold_351

Search features with annotation key words

Displaying items 61-90 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_351_61
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70394..70972)
DNA (579bp) protein (193aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCR5_ACIET
tripartite ATP-independent periplasmic transporter dctq component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACM32065.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
scnpilot_p_inoc_scaffold_351_62
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71058..72077
DNA (1020bp) protein (340aa)
LysR family transcriptional regulator id=12551149 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_351_63
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72318..73202
DNA (885bp) protein (295aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Acidovorax sp. CF316 RepID=J1EEP2_9BURK
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJA12025.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
extracellular solute-binding protein
scnpilot_p_inoc_scaffold_351_64
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73325..74227
DNA (903bp) protein (301aa)
Extracellular solute-binding protein family 3 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYT7_ALIDB rbh
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADU98462.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ali
scnpilot_p_inoc_scaffold_351_65
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74325..75080
DNA (756bp) protein (252aa)
Glutamate/aspartate transport system permease n=2 Tax=Delftia acidovorans RepID=S2WPJ0_DELAC
Glutamate ABC transporter permease {ECO:0000313|EMBL:KEH13491.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruh
glutamate/aspartate transport systempermease protein gltJ
scnpilot_p_inoc_scaffold_351_66
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75082..75753
DNA (672bp) protein (224aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5Q2_ACIDE
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EER60195.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
scnpilot_p_inoc_scaffold_351_67
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75780..76517
DNA (738bp) protein (246aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYU0_ALIDB rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU98465.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
scnpilot_p_inoc_scaffold_351_68
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76651..77700
DNA (1050bp) protein (350aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5Q4_ACIDE
scnpilot_p_inoc_scaffold_351_69
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77921..78802
DNA (882bp) protein (294aa)
protease htpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
heat shock protein HtpX id=12551157 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
heat shock protein HtpX
scnpilot_p_inoc_scaffold_351_70
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79083..80837)
DNA (1755bp) protein (585aa)
FAD dependent oxidoreductase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q605_ACIAP rbh
FAD dependent oxidoreductase; K07137 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
FAD dependent oxidoreductase
scnpilot_p_inoc_scaffold_351_71
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81240..82097
DNA (858bp) protein (286aa)
hypothetical protein id=12553888 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42210.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_p_inoc_scaffold_351_72
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82196..83311
DNA (1116bp) protein (372aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] id=12551276 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
alanine dehydrogenase
scnpilot_p_inoc_scaffold_351_73
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83325..84245)
DNA (921bp) protein (307aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
Cysteine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRX5_ALIDB
cysteine synthase
scnpilot_p_inoc_scaffold_351_74
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84336..84941)
DNA (606bp) protein (202aa)
methyltransferase id=12551167 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
methyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methyltransferase
scnpilot_p_inoc_scaffold_351_75
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85175..86041)
DNA (867bp) protein (289aa)
RNA-binding S4 domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFT4_ACIET rbh
RNA-binding s4 domain-containing protein
RNA-binding S4 domain protein {ECO:0000313|EMBL:ACM34435.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreu
scnpilot_p_inoc_scaffold_351_76
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86034..87698)
DNA (1665bp) protein (555aa)
beta-lactamase domain-containing protein id=12551172 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
beta-lactamase domain-containing protein
scnpilot_p_inoc_scaffold_351_77
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87758..88807
DNA (1050bp) protein (350aa)
Ser/Thr protein phosphatase family protein; K07098 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein; K07098 id=5082352 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
scnpilot_p_inoc_scaffold_351_78
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88810..89514)
DNA (705bp) protein (235aa)
glutathione S-transferase domain-containing protein; K11209 GST-like protein id=12551176 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutathione S-transferase domain-containing protein; K11209 GST-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glutathione S-transferase domain-containing protein
scnpilot_p_inoc_scaffold_351_79
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89574..90452
DNA (879bp) protein (293aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7) id=12551177 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
dapF; diaminopimelate epimerase (EC:5.1.1.7) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
dapF; diaminopimelate epimerase (EC:5.1.1.7)
scnpilot_p_inoc_scaffold_351_80
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90449..91168
DNA (720bp) protein (240aa)
hypothetical protein id=12551178 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_351_81
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91226..92299
DNA (1074bp) protein (358aa)
phage integrase family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
phage integrase family protein id=12551179 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
tyrosine recombinase xerc
scnpilot_p_inoc_scaffold_351_82
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92374..92760
DNA (387bp) protein (129aa)
id=12551180 bin=BDI tax=BDI organism_group=Betaproteobacteria
id=12551180 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_351_83
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92938..95211
DNA (2274bp) protein (758aa)
tonb-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein id=12551181 bin=BDI species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
tonb-dependent receptor
scnpilot_p_inoc_scaffold_351_84
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95227..95652
DNA (426bp) protein (142aa)
exbB3; biopolymer transport protein Exbb; K03561 biopolymer transport protein ExbB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Biopolymer transport protein exbB id=1270152 bin=GWE1_Burkholderiales_65_30 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
exbB; biopolymer transport protein Exbb
scnpilot_p_inoc_scaffold_351_85
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95655..96023
DNA (369bp) protein (123aa)
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD id=12551183 bin=BDI species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=BDI organism_group=Betaproteobacteria
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
exbD; biopolymer transport protein ExbD
scnpilot_p_inoc_scaffold_351_86
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96020..96763
DNA (744bp) protein (248aa)
tonB; TonB-dependent receptor; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Ferric siderophore transport system, periplasmic binding protein TonB id=12551184 bin=BDI species=uncultured Desulfofustis sp. PB-SRB1 genus=Desulfofustis taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Ferric siderophore transport system, periplasmic binding protein TonB
scnpilot_p_inoc_scaffold_351_87
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96765..100928
DNA (4164bp) protein (1388aa)
cobN; cobaltochelatase subunit CobN (EC:6.6.1.2); K02230 cobaltochelatase CobN [EC:6.6.1.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cobN; cobaltochelatase subunit CobN (EC:6.6.1.2)
CobN/magnesium chelatase id=1270155 bin=GWE1_Burkholderiales_65_30 species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
scnpilot_p_inoc_scaffold_351_88
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100925..101470
DNA (546bp) protein (182aa)
hypothetical protein id=12551186 bin=BDI species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_351_89
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101463..101822
DNA (360bp) protein (120aa)
hypothetical protein id=12551187 bin=BDI species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_351_90
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101945..102175
DNA (231bp) protein (77aa)
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TRW0_ALIDB
hypothetical protein
Response regulator receiver {ECO:0000313|EMBL:ADV01437.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
Displaying items 61-90 of 161 in total

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