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scnpilot_p_inoc_scaffold_462

Search features with annotation key words

Displaying items 31-60 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_462_31
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25319..25648)
DNA (330bp) protein (110aa)
hypothetical protein id=12550164 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_462_32
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25738..26040)
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12549666 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_462_33
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26037..26381)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YGQ6_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_462_34
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26371..26679)
DNA (309bp) protein (103aa)
hypothetical protein; K07075 id=12549667 bin=BDI species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K07075 Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
hypothetical protein
scnpilot_p_inoc_scaffold_462_35
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27051..28877
DNA (1827bp) protein (609aa)
Nerd domain protein id=1267953 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_462_36
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29505..30173
DNA (669bp) protein (223aa)
Putative zinc finger/helix-turn-helix protein, YgiT family n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DTU4_THIND
mqsA_[H]; putative zinc finger/helix-turn-helix protein, YgiT family
Putative zinc finger/helix-turn-helix protein, YgiT family {ECO:0000313|EMBL:AGA32422.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Th
scnpilot_p_inoc_scaffold_462_37
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30849..31076)
DNA (228bp) protein (76aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutamine--tRNA ligase; Glutamin
PREDICTED: probable glutamine--tRNA ligase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11285
glutaminyl-tRNA synthetase
scnpilot_p_inoc_scaffold_462_38
unknown

Not on your lists

comp(31091..31279)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_462_39
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31246..31836)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TLW1_9CYAN
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_462_40
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31837..33705)
DNA (1869bp) protein (623aa)
glutaminyl-tRNA ligase (EC:6.1.1.18) Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] id=5079188 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glutaminyl-tRNA synthetase (EC:6.1.1.18)
scnpilot_p_inoc_scaffold_462_41
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33883..34245
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3F0_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:KJA09446.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_462_42
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34365..34811
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] id=12549671 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
scnpilot_p_inoc_scaffold_462_43
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34816..35226
DNA (411bp) protein (137aa)
Class I peptide chain release factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3E7_ACIDE
class I peptide chain release factor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
class I peptide chain release factor
scnpilot_p_inoc_scaffold_462_44
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35353..36192
DNA (840bp) protein (280aa)
extradiol ring-cleavage dioxygenase III subunit B id=12549672 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
extradiol ring-cleavage dioxygenase III subunit B Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
extradiol ring-cleavage dioxygenase III subunit B
scnpilot_p_inoc_scaffold_462_45
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36242..36913
DNA (672bp) protein (224aa)
Phospholipase/Carboxylesterase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3E5_ACIDE
phospholipase/carboxylesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
phospholipase/carboxylesterase
scnpilot_p_inoc_scaffold_462_46
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36923..37396)
DNA (474bp) protein (158aa)
asnC family transcriptional regulator id=12549674 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
asnC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
asnC family transcriptional regulator
scnpilot_p_inoc_scaffold_462_47
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37529..38803
DNA (1275bp) protein (425aa)
methionine gamma-lyase (EC:4.4.1.11) id=12549675 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
methionine gamma-lyase (EC:4.4.1.11) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methionine gamma-lyase (EC:4.4.1.11)
scnpilot_p_inoc_scaffold_462_48
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38739..39224)
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023762A7
asnC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
AsnC family transcriptional regulator
scnpilot_p_inoc_scaffold_462_49
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39327..42005
DNA (2679bp) protein (893aa)
Pyruvate dehydrogenase E1 component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAV1_ACIET rbh
2-oxoacid dehydrogenase subunit E1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
2-oxoacid dehydrogenase subunit e1
scnpilot_p_inoc_scaffold_462_50
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42044..42961)
DNA (918bp) protein (306aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glycosyl transferase family protein id=5079235 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_462_51
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43113..43409)
DNA (297bp) protein (99aa)
hypothetical protein id=12553850 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_462_52
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43737..44174
DNA (438bp) protein (146aa)
signal-transduction protein id=12553851 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
signal-transduction protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
signal-transduction protein
scnpilot_p_inoc_scaffold_462_53
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44324..45487
DNA (1164bp) protein (388aa)
extracellular ligand-binding receptor id=12552489 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_462_54
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45537..46922)
DNA (1386bp) protein (462aa)
L-serine dehydratase 1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
L-serine dehydratase 1 id=12552488 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
L-serine dehydratase 1
scnpilot_p_inoc_scaffold_462_55
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47203..48120)
DNA (918bp) protein (306aa)
Squalene/phytoene synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVI3_9BURK
squalene/phytoene synthase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
squalene/phytoene synthase
scnpilot_p_inoc_scaffold_462_56
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48172..49383
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000373421C
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_462_57

Not on your lists

49391..52636
DNA (3246bp) protein (1082aa)
Putative transmembrane drug efflux protein n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VTW8_9BACT rbh
Putative transmembrane drug efflux protein {ECO:0000313|EMBL:AGC72627.1}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_462_58

Not on your lists

52886..54208
DNA (1323bp) protein (441aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VYS6_9BACT rbh
tig; trigger factor
scnpilot_p_inoc_scaffold_462_59
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54342..54950
DNA (609bp) protein (203aa)
clpP; ATP-dependent clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=535289 spe
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=CLPP_ACIET rbh
scnpilot_p_inoc_scaffold_462_60

Not on your lists

55053..56318
DNA (1266bp) protein (422aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VY65_9BACT rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacte
clpX; ATP-dependent protease ATP-binding subunit clpx
Displaying items 31-60 of 75 in total

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