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scnpilot_p_inoc_scaffold_631

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_631_31
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30859..31965)
DNA (1107bp) protein (369aa)
transposase n=1 Tax=Janthinobacterium lividum RepID=UPI000289612B rbh
transposase, IS4 family Tax=CG_Rhodof_01
transposase IS4
scnpilot_p_inoc_scaffold_631_32
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32360..32470)
DNA (111bp) protein (37aa)
Integrase, catalytic region n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCB6_ACISJ
integrase catalytic region protein
Integrase catalytic region protein {ECO:0000313|EMBL:GAO21139.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
scnpilot_p_inoc_scaffold_631_33
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32514..32915)
DNA (402bp) protein (134aa)
SpoVT/AbrB domain protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N9W3_9BURK
SpoVT/AbrB domain protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SpoVT/AbrB domain protein
scnpilot_p_inoc_scaffold_631_34
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33199..34944)
DNA (1746bp) protein (582aa)
sulfate transporter Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
sulfate transporter id=5080932 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sulfate transporter
scnpilot_p_inoc_scaffold_631_35
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34944..35405)
DNA (462bp) protein (154aa)
Transcriptional regulator, AsnC family n=2 Tax=Acidovorax RepID=A1W797_ACISJ
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABM42122.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_631_36
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35731..36702
DNA (972bp) protein (324aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ63_ACIET
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ACM33201.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acid
scnpilot_p_inoc_scaffold_631_37
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36780..37280
DNA (501bp) protein (167aa)
UPI0003A5B81A related cluster n=1 Tax=unknown RepID=UPI0003A5B81A rbh
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:GAD24923.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
tripartite ATP-independent periplasmic transporter dctq component
scnpilot_p_inoc_scaffold_631_38
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37277..38554
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U1U1_ALIDB rbh
trap dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADV00080.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alic
scnpilot_p_inoc_scaffold_631_39
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38561..39622)
DNA (1062bp) protein (354aa)
Beta-lactamase domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE04_ALIDK rbh
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEB84898.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
scnpilot_p_inoc_scaffold_631_40
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39959..41095
DNA (1137bp) protein (379aa)
glycine cleavage system t protein; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glycine cleavage system t protein; K00605 aminomethyltransferase [EC:2.1.2.10] id=12553242 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glycine cleavage system t protein
scnpilot_p_inoc_scaffold_631_41
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41186..41560
DNA (375bp) protein (125aa)
glycine cleavage system h protein; K02437 glycine cleavage system H protein id=12553243 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
scnpilot_p_inoc_scaffold_631_42
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41691..44585
DNA (2895bp) protein (965aa)
glycine dehydrogenase; K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1U5_ALIDB
glycine dehydrogenase
scnpilot_p_inoc_scaffold_631_43
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44624..45097
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037D1650
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46012.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
scnpilot_p_inoc_scaffold_631_44
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45144..47297
DNA (2154bp) protein (718aa)
PAS/PAC sensor hybrid histidine kinase id=12550291 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PAS/PAC sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_631_45
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47284..47967
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F7DA3
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:GAD24176.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
pseudouridine synthase
scnpilot_p_inoc_scaffold_631_46
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47964..48728
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ54_ACIET
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACM33192.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
scnpilot_p_inoc_scaffold_631_47
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48936..49445
DNA (510bp) protein (170aa)
Hemerythrin-like metal-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC77_ALIDK
hemerythrin-like metal-binding protein
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:GAO23466.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
scnpilot_p_inoc_scaffold_631_48
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49545..49982)
DNA (438bp) protein (146aa)
UspA domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
UspA domain-containing protein id=12550281 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
UspA domain-containing protein
scnpilot_p_inoc_scaffold_631_49
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50224..50607
DNA (384bp) protein (128aa)
type IV pilus assembly PilZ id=12550279 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
type IV pilus assembly PilZ Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
type IV pilus assembly PilZ
scnpilot_p_inoc_scaffold_631_50
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50614..52311)
DNA (1698bp) protein (566aa)
long-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T649_ACIDE
scnpilot_p_inoc_scaffold_631_51
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52635..53975)
DNA (1341bp) protein (447aa)
HipA N-terminal domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7T3_ACIDE rbh
HipA N-terminal domain protein {ECO:0000313|EMBL:EER59473.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax dela
hipA; HipA-like protein rbh
scnpilot_p_inoc_scaffold_631_52
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53977..54192)
DNA (216bp) protein (72aa)
Transcriptional regulator, XRE family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7T4_ACIDE
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EER59474.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
hipB; DNA-binding protein
scnpilot_p_inoc_scaffold_631_53
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54453..54650)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037ECE75
Uncharacterized protein {ECO:0000313|EMBL:GAD24545.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
transposase IS4 family protein
scnpilot_p_inoc_scaffold_631_54
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54675..54854)
DNA (180bp) protein (60aa)
Transposase IS3/IS911 family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR52_ALIDB
transposase is3/is911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AEB84790.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
Displaying items 31-54 of 54 in total

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