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scnpilot_p_inoc_scaffold_222_46

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 55284..56462

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Acidovorax radicis RepID=UPI0002375FC0 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 392.0
  • Bit_score: 582
  • Evalue 2.40e-163
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 378.0
  • Bit_score: 575
  • Evalue 6.90e-161
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 381.0
  • Bit_score: 572
  • Evalue 9.00e-161

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCCAAATTTCTCTCTCTTCAAGCTCTCTCCCACCACCCTCGCCGTGGTCGCGGTCTGCGTGCTGGCCACGAGCGGCACCCTGCTGTTTTCCGGCGCCACGCGCGCGGCCGACGCCCCCGCCGCCGGCCCGGCCCGCCCGGCCCTGACGGTGTCCACCGCCCGGCCCCAGCGCGCCGCCATGCCCCTGCACCTGGCCGCCAACGGCAACGTGATGGCCTGGCAGGAGGCGAGCATCGGCGCCGAAAGCAACGGCCTGCGCCTGACCGAGGTGCGTGCCAACGTGGGCGACGTGGTACGCGCTGGCCAGGTGCTGGCGACCTTCGCGGCCGAAACGGTGCAGGCCGACCTGGCCCAGGCCCGCGCCAGCCTGCTCGAAGCCCAGGCCCACGCAGCCGAGGCCACAGCCAACGCCGAGCGTGCGCGCACGCTGCAGGCCACGGGAGCCCTGAGCCAGCAGCAGATCCAGCAGCTCACCACGGCCGAAAAAACCGCCCAGGCCCGTGTTGAAGCCGCCCAGGCCCTGCTGCGCGCCCAGGAACTGCGCCTCCAGCACACCCAGGTGCTGGCCCCTGACAGCGGTGTGATCTCCGCACGCACGGCCACCGTGGGCGCGGTGGTGGGCGCGGGCACCGAGCTGTTCCGCATGGTGCGCAAGGGCCGCCTCGAATGGCGCGCCGAGGTGCTGGCCTCCGAGCTGCGCCCGCTGCGTCCCGGCGCCAAGGCCCGCGTCACCGCTGCCAGCGGTGTCACCGTGGAAGGAACGGTACGCATGGTGGCACCCACCGTCGACCCGCAGACGCGCAATGCCCTGGTCTACGTGGATCTGCCCGCGCACCCGGACCTGCGCGCGGGCATGTTCGCACGCGGCGAGTTCCAGCTCGGCAGCAGCGACGCCCTCACTGTGCCGCAGGAGGCCCTGGTGGTGCGCGACGGCTTCGCCTACGTGTTCGCCGTGGGCGCCGACCAGCGCGTGCAGCAGCGCAAAGTGCAGACCGGACGCCGCCAGGCTGACCGCGTGGAAGTGCTCTCGGGCCTCACCGCGGACACGACCGTGGCGGTGCGCGGCGCAGGCTTCCTCAACGACGGCGATCTGGTGCGCGTGGCGCCGGCCACCGAAGGGTCCGCATCAAAACCTGCTCAAGCGCCCGTCCAACAAGCGCAAACAGCTACCAAATAA
PROTEIN sequence
Length: 393
MPNFSLFKLSPTTLAVVAVCVLATSGTLLFSGATRAADAPAAGPARPALTVSTARPQRAAMPLHLAANGNVMAWQEASIGAESNGLRLTEVRANVGDVVRAGQVLATFAAETVQADLAQARASLLEAQAHAAEATANAERARTLQATGALSQQQIQQLTTAEKTAQARVEAAQALLRAQELRLQHTQVLAPDSGVISARTATVGAVVGAGTELFRMVRKGRLEWRAEVLASELRPLRPGAKARVTAASGVTVEGTVRMVAPTVDPQTRNALVYVDLPAHPDLRAGMFARGEFQLGSSDALTVPQEALVVRDGFAYVFAVGADQRVQQRKVQTGRRQADRVEVLSGLTADTTVAVRGAGFLNDGDLVRVAPATEGSASKPAQAPVQQAQTATK*