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scnpilot_p_inoc_scaffold_278_49

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 55630..56199

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12550243 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 190.0
  • Bit_score: 334
  • Evalue 9.20e-89
  • rbh
RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 189.0
  • Bit_score: 333
  • Evalue 1.70e-88
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 189.0
  • Bit_score: 331
  • Evalue 1.70e-88

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGGCCACTGAAAAAGAACTTTCGGATTTCCTCAAAAGCGTGGAAAAGCGCGCGTTCAAGCGTGCGCTCTACCATGTGCGCAATGAGGAGTCGGCGCTGGACATCGTGCAGGACAGCATGATGCGCCTGGCCGAGCACTATGGAGACAAGCCGCCGGCGGAGCTGCCCATGCTGTTCCAGCGCATCCTCTCGAACTGCACGCTGGACTGGTTCCGGCGGCAGAAAACCCACAATGCCCTGTTCTCCCACATGGCAGACTTCGAGAGCGCCGGGGACGACGGCGATGGCTTTGACCTGCTCGAAGCCTGGAATGGGCCGGAAGACGGCGAACAGGCGCAGAGCGCGCAGGATCTGGCGGAGCGCGGGCAGGTGCTGCGCGACATCGAAGCTGAGATTCAGGAGCTGCCTCCGCGTCAACGCGAGGCATTTCTCATGCGTTATTGGGAAGAAATGGACGTGGCGGAAACTGCAGCCGCCATGGGCTGCTCGGAAGGCAGTGTAAAAACGCATTGTTTCCGTGCCGTGCAGGCCCTGAGCAAGGCGCTGAAGGCCAGAGGTATCAAGCTATGA
PROTEIN sequence
Length: 190
LATEKELSDFLKSVEKRAFKRALYHVRNEESALDIVQDSMMRLAEHYGDKPPAELPMLFQRILSNCTLDWFRRQKTHNALFSHMADFESAGDDGDGFDLLEAWNGPEDGEQAQSAQDLAERGQVLRDIEAEIQELPPRQREAFLMRYWEEMDVAETAAAMGCSEGSVKTHCFRAVQALSKALKARGIKL*