ggKbase home page

scnpilot_p_inoc_scaffold_281_11

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(6848..7693)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] id=12550607 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 281.0
  • Bit_score: 512
  • Evalue 3.70e-142
  • rbh
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 280.0
  • Bit_score: 507
  • Evalue 1.60e-140
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 280.0
  • Bit_score: 448
  • Evalue 1.40e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGACCCGCCCCGCCGACCTGTACTGCGTCATGGGCAACCCCGTGGAGCACAGCCGCTCCCCGTGGATCCACGCCCGCTTTGCCGAACTCACGGGCCAGCACCTGGTGTACGAGCGCCGCCTGGTACCGCTGGACGGCTTTGCCCCGGCGCTGCGCGACTTCGCCGCGGCGGGCGGGCGCGGCTGCAACATCACCGTGCCCTTCAAGCTCGAAGCCGCGCAGGCTGCCAGCGTGCGCAGCGAGCGCGTGCAACTGGCCGGCGCGGCCAACACCCTGAGCTTCATCGACGGCGCCATCCATGCCGACAACACCGACGGCCTGGGCCTGGTGGCCGACATCGAGCAAGGCGCCGGCTGCGCCCTGGCCGGGCGCGACGTGCTGCTCGTGGGCGCGGGCGGCGCCGCCGCCGGGGCCCTGGGCCCGCTGCTGGCGGCCGGGCCGCGCCGCGTGGTGGTGGCCAATCGCACGCTGGAGCGCGCGCAGGCGCTGGTGCGAGCGCATGCCGCGCTTGCAGCGCTACAAAAAACAGAGCTGCTTGCGCAGTCTCCACAAGCGCTGGAGCAGGATTTTGACCTCATCATCAACGCCACCGCCAGCAGCCTGGCCGGTGCCGAGGTGCCCGTGCCCGCGCGCGTGCTGCGCCCCGGCAGCCTGGCCTACGACATGATGTACGGCCCCGCCGCCGCGGGCTTCCTCGGCTGGGCGCGCCAGCACGGCGCCACGCCGCGCGACGGCCTGGGCATGCTGGTGGAACAGGCGGCCGAGGCCTTCCAGATCTGGCGCGGCGTGCGTCCGCCCAGCCGCCAGGTGCTGGCCGAGCTGCGCGCCCTGATGGCCGCGCACTGA
PROTEIN sequence
Length: 282
MTRPADLYCVMGNPVEHSRSPWIHARFAELTGQHLVYERRLVPLDGFAPALRDFAAAGGRGCNITVPFKLEAAQAASVRSERVQLAGAANTLSFIDGAIHADNTDGLGLVADIEQGAGCALAGRDVLLVGAGGAAAGALGPLLAAGPRRVVVANRTLERAQALVRAHAALAALQKTELLAQSPQALEQDFDLIINATASSLAGAEVPVPARVLRPGSLAYDMMYGPAAAGFLGWARQHGATPRDGLGMLVEQAAEAFQIWRGVRPPSRQVLAELRALMAAH*