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scnpilot_p_inoc_scaffold_323_62

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(73500..75242)

Top 3 Functional Annotations

Value Algorithm Source
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 579.0
  • Bit_score: 1020
  • Evalue 1.20e-294
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=12553136 bin=BDI species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 562.0
  • Bit_score: 1002
  • Evalue 2.40e-289
  • rbh
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 565.0
  • Bit_score: 674
  • Evalue 3.20e-191

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Taxonomy

RLO_Burkholderiales_64_99 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGAGCGACACCGCCACCGCCGCCGCACCGCCTCCAGCCGCCGGCCAGCCGCCCATGCGCCTGGGCGACCGGCTCCAGCACATGGGGTTGGTGTCGGCCGACCAGATCCAGATCGCCCTGCTGGAGCAGCGCAAGACCGGCAAGCAGCTCGGCGATGCGCTGATCGCCCTGGGCTTTGTCACCGAGGAGGCCATGCGCGAGGCCCTGGGCCAGACGCTGGGCCAGCAGACCATCCAGCTGCAGACGGTGCTGGCCGATCCGGAGGCGCTGGCGCGCCTGCCCAAGGCCATGGCGCTGCGCTTTCAGGTGTTCCCGGTGTCGTTCCAGGCCGAGACGCAAAAGCTCGTGCTCGCCAGCCCCAAGCCCAACGACATCATCGCCGGCGACCAGATCCGCGCGCATGTGGGGCTGGGGGTGTCGATCTCGTGGCGCCTGGCCAGTGCGGCCGATGTGCTGGCCGCCATCGACCAGTTCTACGGCTATGAACTGTCCATCGACGGGATCATCCAGGAGATTGAGACCGGGCAGATCGACATGGCCTCGCTCTCGCAGGGGCAGGGCGGCTACAGCCACCCGGTGGTGCGCCTGGTGGATGCGCTGCTGTCCGACGGCGTGCACAAGCTCGCTTCGGACATCCACTTCGAGCCCGAGGGCCAATTCCTGCGCATCCGCTACCGCATCGACGGTGTGCTGCGCCAGGTGCGCGTGCTGCATGGCCGCTACTGGAACGCCATGCTGGTGCGCCTCAAGCTGGTGGCAGGTATGAACATTGCCGAGAGCCGGGCGCCCCAGGACGGACGGGTGTCGCTGTCCATCGGCGGGCGCAGCGTGGACTTCCGCGCCGCCGTGCAGCCCACCATCCATGGCGAGAACTTCGTGCTGCGCGTGCTCGACGCCAAGCGCGGCATCGTCGAATACAGCAAGCTGGGGCTGACCGAGGAGCAGTACTACCTGCTCGACCTGATGTTGGCGCGGCCCGAGGGCATCATCCTGGTGACCGGGCCCACGGGTTCGGGCAAGACGACCACGCTGTACTCCGTGCTCAGCCACATGAACGAGGAAAGCGTCAACATCATGACGCTGGAGGACCCGGTCGAGTACCCCATCACGCGCATCCGGCAGACCTCCATCTCGGACGGCAGCAAGATCGACTTTTCCGACGGCGTGCGCTCGCTCATGCGCCAGGATCCGGACATCATCCTGGTGGGCGAGGTGCGCGACAAGGACACCGCCGAAATGGCCTTCCGCGCGGCCATGACGGGCCACCAGGTGTTCTCCACGCTGCACACCAACTCGGCGCTGCGCAGCTTCCAGCGCATCAAGGACCTGGGTGTCTCGCCCGAGGTGATGGCGGGCAACATCATCGGCATCGTGGCCCAGCGCCTGGTGCGGCGCGTGTGCACGCACTGCCGCGAGGAGGTGCAGGTCACCGAGGGCAGCATCGAAGCCCGCCTCATCGGCGCGCACGCCATCGGGCGCACGGTGTACCGCGCCCACCCCGGCGGCTGCGAGGCCTGCGGTTTCCAGGGCTACCGCGGGCGCCTGGCCATCATGGAGCTGCTGCGCATGGACAGCATGCTCGATGAGCTCATCACGCGCAACGCCACTTTGGGCGAGCTGACGGCGCATGCCATGGCCCATGGCTTCGTGCCCATGGCCGAGGACGGGCTGCGCCGCGTGCTCGAGGGCATCACTACCGTGGAAGAGGTGGGCCGGGTGGTCGACCTGACCACCAGGCTGTAA
PROTEIN sequence
Length: 581
MSDTATAAAPPPAAGQPPMRLGDRLQHMGLVSADQIQIALLEQRKTGKQLGDALIALGFVTEEAMREALGQTLGQQTIQLQTVLADPEALARLPKAMALRFQVFPVSFQAETQKLVLASPKPNDIIAGDQIRAHVGLGVSISWRLASAADVLAAIDQFYGYELSIDGIIQEIETGQIDMASLSQGQGGYSHPVVRLVDALLSDGVHKLASDIHFEPEGQFLRIRYRIDGVLRQVRVLHGRYWNAMLVRLKLVAGMNIAESRAPQDGRVSLSIGGRSVDFRAAVQPTIHGENFVLRVLDAKRGIVEYSKLGLTEEQYYLLDLMLARPEGIILVTGPTGSGKTTTLYSVLSHMNEESVNIMTLEDPVEYPITRIRQTSISDGSKIDFSDGVRSLMRQDPDIILVGEVRDKDTAEMAFRAAMTGHQVFSTLHTNSALRSFQRIKDLGVSPEVMAGNIIGIVAQRLVRRVCTHCREEVQVTEGSIEARLIGAHAIGRTVYRAHPGGCEACGFQGYRGRLAIMELLRMDSMLDELITRNATLGELTAHAMAHGFVPMAEDGLRRVLEGITTVEEVGRVVDLTTRL*