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scnpilot_p_inoc_scaffold_385_7

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 5655..6584

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y196_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 309.0
  • Bit_score: 506
  • Evalue 1.70e-140
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO20716.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 309.0
  • Bit_score: 608
  • Evalue 4.40e-171
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 309.0
  • Bit_score: 505
  • Evalue 1.10e-140
  • rbh

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
TTGGAGCTCTCTGACATCGACCTGAACCAGCTGGTGCTGTTTCACCAGCTCATGGTGGAGCGGCGGGTCTCCAAGGTCGCGGACAACCTCAACCTCACCCAGCCCGCCGTCAGCAACTCCCTGGCCAAGCTGCGCCGGCTGTTCGGGGACGAACTGTTCCTGCGCACTTCCTCCGGGATGGTCCCCACGCCCTTCGCCGAGCAGTTGGCCGAGCCGGTCGGCTACGCCCTGGCGATGATCCACAGCGGCATCAACCAGCAGAATGACTTCGACCCGGCGAAGCTGAACCGTCCGGTCACGATCGGGATGACCGACATCGGCGAGATCGTCTTCCTTCCCGCGCTGGTGGAGCGCCTGACCCGCGAAGCGCCGGGCGCCACACTGAACACGGTACGCAACACCGCCGTCAACCTGCGCGACGACATGGAGTCCGGGAAGGTGGATCTCGCCATCGGTCTCCTGCCCCAGCTCAAGGCGGGCTTCTTCCAGCGGCGGCTGTTCCGGCAGCACTATGTCTGCCTGTTCCGCCAGGGCCACGCACTGGACCGGAAGCGGCTGTCGCTGGCCGACATCAAGGCCGCCCAGCACCTCGTGATCGTCTCGGCAGGGACCGGCCACGGCACGGTGGACGAGCTGATCCGCCGGGCCGGCGTCGACCGCACCACGCGCCTGACCATCCCCCATTTCGTGAGCGTCGGCCACATCCTGCAGCGCACCGACCTGATCGCCACCGTGCCGGACAAGCTCGCCGACCGGCTCGCCGAGCCGTTCGGCCTGACGTCCCGGCCGCATCCCGTGGCCCTGCCCGAGATCTCGATCAATGCCTTCTGGCATGCGAAGGTGCACCGCTCCCCCGTCAACCAGTGGCTGCGCGGCGTGGTCTTCGACCTCTTCGGCGAGGACCGCGCGCGCGAGCGGGCGATCGCCTAG
PROTEIN sequence
Length: 310
LELSDIDLNQLVLFHQLMVERRVSKVADNLNLTQPAVSNSLAKLRRLFGDELFLRTSSGMVPTPFAEQLAEPVGYALAMIHSGINQQNDFDPAKLNRPVTIGMTDIGEIVFLPALVERLTREAPGATLNTVRNTAVNLRDDMESGKVDLAIGLLPQLKAGFFQRRLFRQHYVCLFRQGHALDRKRLSLADIKAAQHLVIVSAGTGHGTVDELIRRAGVDRTTRLTIPHFVSVGHILQRTDLIATVPDKLADRLAEPFGLTSRPHPVALPEISINAFWHAKVHRSPVNQWLRGVVFDLFGEDRARERAIA*