ggKbase home page

scnpilot_p_inoc_scaffold_464_106

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(100756..101382)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 202.0
  • Bit_score: 309
  • Evalue 7.50e-82
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 202.0
  • Bit_score: 309
  • Evalue 3.70e-81
Pseudouridine synthase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8T2_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 202.0
  • Bit_score: 309
  • Evalue 2.70e-81
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGACGGCGCGCAAGACCCTGGCCCTGCCGGCGCGCCAGCGCCCGCCCGCAGCAGCGCGCCCGGCCCCGCCGCGCGCCGCGCCGCCCCGGCTGCTGCGCTTTTGCAAGCCCTATGGCGTGCTCAGCCAGTTCACGCCCGAGGGGCGCTGGCGCGGGCTCAAGGATTTCATCGACCTGCCCGGCGTGTACGTGGCCGGGCGGCTGGACGCCGACAGCGAGGGCCTGCTGCTGCTCACCAACGACGGGCGGCTGCAGGCGCGCATCAGCGACCCGCGCCACAAGATGGAGAAGACCTACTGGGTGCAGGTCGAAGGCCTGGCCAGCGACGCGCAACTCGAATCCCTGCGCCGCGGCGTGCTGCTCAACGACGGCCCCACCCTGCCCGCGCAGGTGCAGCGCCTGGAGCCGCCGCCCACGCTGTGGCCGCGCGACCCGCCCATCCGCGTGCGCCAGAGCGTGCCCGACTGCTGGCTGGCCATCACCATCCGCGAGGGCCGCAACCGCCAGGTGCGCCGCATGACGGCCGCCGTGGGCCTGCCCACGCTGCGCCTGGTGCGCGTGCGCATCGGTCCCTGGAGCATCGAGGGCCTGGCGCCGGGGCAGTGGCAGGACGCCCCTGCCCTTTGA
PROTEIN sequence
Length: 209
MTARKTLALPARQRPPAAARPAPPRAAPPRLLRFCKPYGVLSQFTPEGRWRGLKDFIDLPGVYVAGRLDADSEGLLLLTNDGRLQARISDPRHKMEKTYWVQVEGLASDAQLESLRRGVLLNDGPTLPAQVQRLEPPPTLWPRDPPIRVRQSVPDCWLAITIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWSIEGLAPGQWQDAPAL*