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scnpilot_p_inoc_scaffold_511_34

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(35474..36112)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE id=12552449 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 214.0
  • Bit_score: 351
  • Evalue 8.20e-94
  • rbh
RNA polymerase sigma factor RpoE Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 213.0
  • Bit_score: 351
  • Evalue 1.10e-93
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 208.0
  • Bit_score: 339
  • Evalue 5.30e-91

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGACCCATCCATCGTCCGCTTCTCCTCCGCCAAGCCCGGCCGACAGCGATCTGCTGCTGGTCGAGCGCACCGTGGCCGGGGATTTGCGCGCCTACGACCTGCTGGTGATCAAGTACCAGCGCCGCATCGAGCGCCTCATCGGCCGCATGGTGCGCGATACCGATCTGGTGCAGGACATAGCGCAAGAGACCTTTCTGCGCGCCTACCGTGCGCTGCACCAGTTCCGCGGCGAAGCCCAGTTCTACACCTGGCTGTACCGCATCGCCGTGAACACGGCCAAGAAAGCCTTGATGGATCTCAAGCGCGACCCCTTGGTCTACGAGGGCGCGCTGCGACCCGAGGGCGAAGACGATGAAACTTCCCGCCCCGTGCAGGAACCAACCAGCGACGAAACCCCCGAAACCGTGCTGGCGGCGCGAGAAATAGCGGCCGCTGTGAATGCCGCCATGGAAGCGCTGCCCGAGGATTTGCGCCAGGCCGTGACGCTGCGCGAGATCGAGGGCTTGAGCTACGAGGAAATCGCCACGGCCATGGCCTGCCCGATCGGCACGGTGCGCTCGCGCATCTTCCGGGCGCGCGAAGCCATTTCGGCGCGCGTGCGCCCGCTGCTGGAAAACCGCAGTGGCAAGCGCTGGTGA
PROTEIN sequence
Length: 213
MTHPSSASPPPSPADSDLLLVERTVAGDLRAYDLLVIKYQRRIERLIGRMVRDTDLVQDIAQETFLRAYRALHQFRGEAQFYTWLYRIAVNTAKKALMDLKRDPLVYEGALRPEGEDDETSRPVQEPTSDETPETVLAAREIAAAVNAAMEALPEDLRQAVTLREIEGLSYEEIATAMACPIGTVRSRIFRAREAISARVRPLLENRSGKRW*