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scnpilot_p_inoc_scaffold_628_48

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 50604..51080

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA; K03624 transcription elongation factor GreA id=12551542 bin=BDI species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 159.0
  • Bit_score: 284
  • Evalue 5.40e-74
transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 158.0
  • Bit_score: 284
  • Evalue 7.50e-74
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 158.0
  • Bit_score: 280
  • Evalue 3.70e-73

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCCACCATTCCAATTACCAAGCGCGGTGCCGAGAAGCTCAAGACCGAGCTGCACCGCCTCAAGACCGTGGATCGCCCGGCGGTGATTGCCGCCATTGCCGAAGCCCGTGCCCAGGGTGACCTGAGCGAAAACGCCGAGTACGAAGCTGCCAAGGACCGCCAGGGCTTCATTGAAGGCCGCATCCAGGAAATCGAGGGCAAGCTCTCGGCGGCGCAAATCATCGACCCTTCCGCGGTGGATGCCGCCGGTCGCGTGGTCTTCGGGGCCACGGTCGAGCTGGAAGACGAAGATTCGGGCGACGCCGTGACCTACCAGATCGTGGGCGAGGACGAGGCCGACCTCAAGCAGGGCCTGATCAACATCGGCAGCCCCATCGCGCGCGCCCTCATCGGCAAGGAGCAGGGCGACACCGCCGAGGTGCAGGCGCCCGGCGGCGTGCGCCGCTACGAAATCGTCGGCGTGCGCTATGTCTGA
PROTEIN sequence
Length: 159
MATIPITKRGAEKLKTELHRLKTVDRPAVIAAIAEARAQGDLSENAEYEAAKDRQGFIEGRIQEIEGKLSAAQIIDPSAVDAAGRVVFGATVELEDEDSGDAVTYQIVGEDEADLKQGLINIGSPIARALIGKEQGDTAEVQAPGGVRRYEIVGVRYV*