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scnpilot_p_inoc_scaffold_646_3

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 3408..4670

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=232721 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 420.0
  • Bit_score: 800
  • Evalue 1.10e-228
Transcription termination factor Rho n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8E4_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 420.0
  • Bit_score: 800
  • Evalue 7.70e-229
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 420.0
  • Bit_score: 800
  • Evalue 2.20e-229

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCACCTTAACGAGCTCAAGGCACTGCACGTGTCTGAAGTCCTGAAGCAGGCCGAAGCCCTGGAAATCGAGAACGGCAGCCGCATGCGCAAGCAGGAGCTGATGTTCGCCATCATCAAGAAGCGCGCCAAGGCCGGCGAACAGGTGTTTGCCGACGGCGTGCTCGAAATCCTGCCCGATGGCTTTGGTTTCCTGCGCAGCCCGGACACCAGCTACACCGCCAGCACCGACGACATCTACATCAGCCCCAGCCAGGTGCGGCGCTTCAACCTGCACACCGGCGACATGATCGAGGGCGAGGTGCGCATCCCCAAGGACGGCGAGCGCTACTTCGCACTGACCAAGCTCGACACGGTCAACGGCCTGGCACCCGAGCAGAACAAGCACAAGGTGATGTTCGAGAACCTCACGCCGCTGTTCCCCAAGGAACAGATGCGCCTGGAACGCGACATCAAGTCCGAGGAGAACATCACCGGCCGCATCATCGACATCATCGCGCCCATCGGCCGCGGCCAGCGTGCGCTCATCGTCGCGCCCCCCAAGAGCGGCAAGACGGTGATGATGCAGCACATCGCCCACGCCATCACCGCCAACAACCCCGACGTGCACCTGATGGTGCTGCTGGTGGACGAACGCCCCGAGGAAGTGACCGAGATGCAGCGCTCGGTCAAGGGCGAGATCATCGCCTCCACCTTCGACGAGCCTGCCGCGCGCCACGTGCACGTGGCCGAGATGGTGATCGAGCGCGCCAAGCGCCTGGTGGAGCTGAAGAAGGACGTGGTCATCCTGCTCGACTCCATCACGCGCCTGGCACGGGCCTACAACAACGTGGTGCCCTCCAGCGGCAAGGTGCTCTCGGGCGGCGTGGACTCCAACGCGCTGCAGCGCCCCAAGCGCTTCTTCGGTGCGGCGCGCAAAGTCGAGGAAGGCGGTTCGCTGACCATCATCGCCACGGCCCTGGTCGATACCGGCAGCCGCATGGACGAAGTGATCTTTGAAGAATTCAAGGGCACGGGCAACTGCGAAATCCACCTGAGCCGCCGCCTCTACGAAAAGCGCGTGTTCCCGGCCATCGAGCTCAACAAGAGCGGCACGCGCCGCGAGGAACTGCTGCTGGCGCCCGAGATCCTGCAGAAGACGCGCATCCTGCGCCAGTTCATGTACAACATGGACGAGATCGAGTCCATGGAACTCATGATCAAGAAGATGAAGGAAACCAAGACCAACGTGGAATTCTTCGAGGCCATGCGCCGCGGCGGATAA
PROTEIN sequence
Length: 421
MHLNELKALHVSEVLKQAEALEIENGSRMRKQELMFAIIKKRAKAGEQVFADGVLEILPDGFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRIPKDGERYFALTKLDTVNGLAPEQNKHKVMFENLTPLFPKEQMRLERDIKSEENITGRIIDIIAPIGRGQRALIVAPPKSGKTVMMQHIAHAITANNPDVHLMVLLVDERPEEVTEMQRSVKGEIIASTFDEPAARHVHVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDSNALQRPKRFFGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLSRRLYEKRVFPAIELNKSGTRREELLLAPEILQKTRILRQFMYNMDEIESMELMIKKMKETKTNVEFFEAMRRGG*