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scnpilot_p_inoc_scaffold_814_30

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(28734..29465)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-28 subunit FliA/WhiG id=12553402 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 242.0
  • Bit_score: 418
  • Evalue 4.80e-114
  • rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 238.0
  • Bit_score: 387
  • Evalue 1.60e-104
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 238.0
  • Bit_score: 381
  • Evalue 1.40e-103

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
GTGGTTGAAGTGACTTACACCGCCAAAGGCCAGCTCGATCGCAACGCCTTGCTCCAGCAGTACGCTCCGCTGGTGCGCCGCCTTGCGCACCACATGATCGCCAAGCTGCCGGCCAATGTGGAGCTCGATGACCTGATCCAGGTGGGGATGATCGGCCTGAACGACGCGCTGACGCGTTACGAGGCTTCCCAGGGCGCGCAGTTCGAGACCTTTGCCACGCAGCGCATCCGCGGCGCCATGCTCGACGAACTGCGTGACAACGACTGGATGAGCCGCGGCGCACGCAAAAGCCAGAAAGACATCGAGAAAGCCGTGCAGCGCTTGGAACAAAAGCTCGGGCGCAGCCCGATGGAATCGGAAATCGCCGTGGAGATGGACATGAGCCTGGCCGATTACCAGAGCCTGCTGACCAAGGTGCGCGGCACCCAGCTCGTGTACCTGGAGGACATGGCGCGCGGCGGCGAAGACGACGAGGGCTTCCTTGAACGGCACGAGTCCCCCGACAGCGAGGCCGACCCCATGGCCCTGCTGCGCAACCAGCGCCTGCGCTCCTCGCTGGTCCATGCCATCCAGTCACTGCCCGAGCGCGAGCAGTACATCATGGGCATGTACTACGAGCACGACATGAACCTCAAGGAAATCGCCGCGGTGCTGGGCGTGACGGAATCGCGCGTGTGCCAGTTGCACAGCCAGTCGATCGCCCGTTTGCGCGCCAAGATGCGCACGCACTGA
PROTEIN sequence
Length: 244
VVEVTYTAKGQLDRNALLQQYAPLVRRLAHHMIAKLPANVELDDLIQVGMIGLNDALTRYEASQGAQFETFATQRIRGAMLDELRDNDWMSRGARKSQKDIEKAVQRLEQKLGRSPMESEIAVEMDMSLADYQSLLTKVRGTQLVYLEDMARGGEDDEGFLERHESPDSEADPMALLRNQRLRSSLVHAIQSLPEREQYIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQSIARLRAKMRTH*