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scnpilot_p_inoc_scaffold_1161_8

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(7288..7542)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D6890 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 82.0
  • Bit_score: 152
  • Evalue 2.20e-34
host factor Hfq; K03666 host factor-I protein Tax=CG_Rhodof_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 82.0
  • Bit_score: 150
  • Evalue 9.00e-34
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 83.0
  • Bit_score: 149
  • Evalue 5.30e-34

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Taxonomy

CG_Rhodof_04 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
GTGAGCAATAAAGGCCAACTTCTTCAAGATCCGTTCCTCAACGCCTTGCGCAGGGAACATGTGCCGGTCTCGATCTACTTGGTCAATGGGATCAAGCTTCAGGGCCAGATCGAGTCATTCGATCAATACGTGGTGCTGCTGCGCAACACCGTGACCCAGATGGTCTACAAGCACGCCATTTCCACGATTGTGCCGGGCCGTGCCGTCAATTTTTCGGTGAGCGATGGCGCCGAGACCGCCAGCGGCGGTGCGTGA
PROTEIN sequence
Length: 85
VSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTIVPGRAVNFSVSDGAETASGGA*