ggKbase home page

scnpilot_p_inoc_scaffold_1161_18

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(17055..18335)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase id=12552296 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 447.0
  • Bit_score: 561
  • Evalue 8.00e-157
pseudouridine synthase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 439.0
  • Bit_score: 561
  • Evalue 1.10e-156
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 463.0
  • Bit_score: 558
  • Evalue 1.90e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGACGATTGACACTTCGCCCTCTGAACCCCTGCCGCCCCAGCCTGCCGCCTCTGAGGCAGCGGTCCAGCCTTCCGTGCCGCCCGAGGGGGCGCGGCCAGCGCGCGCGCGGCGCAAGCCGCAGGGAGGTGCCGGGGCGGATGCCGGTGCACCGCCGGCGGTACCCGGCTATGCATTCGCCGACGTGGTCTCCGGCCAGTTCGACGCCGATGGCGCCACGGTCGAAGGCGCGGCGCCGCCCAAGCGCGTGCTCCAGCCGCAGGCGGAAACCCCCAAGCTGCACAAGGTTCTGGCACAGGCCGGCTTGGGGTCGCGTTTGGAAATGGAACAAATGATCCTGGAAGGGCGCATCTCGGTGAACAACGAGCCGGCGCACATCGGTCAGCGCATCCAGTACGGCGATCAGATCAAGATCAACGGCAAGCCCATCCGGGTGCGCATCGACCCGCCGCCGCCGCGCGTAGTGGCCTACCACAAGCCCGTGGGTGAAGTAGTCACGCACGACGACCCGCAGAACCGGCCCACGGTGTTTCGCCGCCTGCCGCGCCTGCAGCAGGGCAAATGGCAGTCCGTGGGGCGCCTGGATCTCAATACCGAGGGGCTGCTGCTGTTCACCAATTCGGGTGAGCTGGCCAACAAGCTCATGCACCCGCGTTTCGGCCTGGAGCGGGAATACGCCGTGCGCGTGCTCGGCGCGCTCAGCGAGGACGAGCGCGCCCGCCTGCTCGAGGGCGTGGCGCTGGACGATGGCACGGCCGCGTTTGGCTCCATCGAAGACGGCGGCGGCGAGGGGGTCAACTGCTGGTACCGCGTGACCATCTCCGAAGGCCGTAACCGCGAGGTGCGGCGCATGTTTGAAGCTGTGGGCCATGCAGTGAGCCGGCTGATCCGCATACGCTATGGCGCCATGGTGCTGCCCCGGGGCCTGGCGCGTGGCACCTGGATGGAGCTCGACGCTGCAGACATCGCCGCCCTGATGCGTGCTGCCGGTGTGCAGGCGCGGCCGCCGGCCGCACCCCGCGGTGATGGGGCTGCGCGCCGCGCCCGCCCCGGCAAGGACAATGCCCGCGGCTGGAGCCAGGGTCCGCGCGATGCGTCCCGCGAGCCCGGCAGGTCCGCCAAGGGCGCCGGCGCCCGGCAAGGCCAGCGCACGGCAGGCAGCGGGCAGCCCGATCCGCTCAAGACCTCGCTGGGGTACATCGGCTCGGACAGCCTGCAGCGCCAGAGGCAGGCCCAAAGGCGTGAGGGGCGCGGCCAGGGCGCGCGTCGCGGCGGCCGCTGA
PROTEIN sequence
Length: 427
MTIDTSPSEPLPPQPAASEAAVQPSVPPEGARPARARRKPQGGAGADAGAPPAVPGYAFADVVSGQFDADGATVEGAAPPKRVLQPQAETPKLHKVLAQAGLGSRLEMEQMILEGRISVNNEPAHIGQRIQYGDQIKINGKPIRVRIDPPPPRVVAYHKPVGEVVTHDDPQNRPTVFRRLPRLQQGKWQSVGRLDLNTEGLLLFTNSGELANKLMHPRFGLEREYAVRVLGALSEDERARLLEGVALDDGTAAFGSIEDGGGEGVNCWYRVTISEGRNREVRRMFEAVGHAVSRLIRIRYGAMVLPRGLARGTWMELDAADIAALMRAAGVQARPPAAPRGDGAARRARPGKDNARGWSQGPRDASREPGRSAKGAGARQGQRTAGSGQPDPLKTSLGYIGSDSLQRQRQAQRREGRGQGARRGGR*