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scnpilot_p_inoc_scaffold_1451_15

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 14791..15501

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein id=12552700 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 117.0
  • Bit_score: 205
  • Evalue 4.70e-50
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 116.0
  • Bit_score: 204
  • Evalue 1.90e-49
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 116.0
  • Bit_score: 199
  • Evalue 1.20e-48

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCACCAGATTTCACAGACCGCCATTTCCATGGGCCAATACGTCGTTTCGCCCGCGACACACCCCACCGACTGTGGCCGCTTTCGCGTCTCCTTCTCGGTCCAGCGCTCCCAGGGCAACGGCAGCTACTGCCGCGTGTTCCGCTTTGACAAAGCCTTCGCCTCGCGCGAAGCCGCCCGGCTCTTTGCAGTCACCCAGGGCTGGCTGCAAGCGAGCATGCAGCCAGCCCGTGTGCTGACGCATGATCTGGACACCCCAGACCCCCTCCCCCCTTCTCCGTTGTTGCGGACTCCCGATCCGCACATTCATACCCCAACGGTGCGCCATCCATTGCGCGCCATTACTCAGAAAGGCTCATCCATGAGCAGCAAAATCTACGTGGGCAACCTGCCCTACTCCGTGACCGACTCCAGCCTGGAAAGCAACTTTGCCGAATTTGGCCAAGTCTCCTCGGCCAAGGTCATGATGGACCGCGACACCGGCCGCTCCAAAGGCTTCGGCTTTGTGGAAATGGCCTCGGCCGAATTCGCCCAGGCCGCCATCAACGCGCTGAACGGCATGTCCGTCGATGGCCGCGCCATCGTCGTGAACCTGGCCCGCCCCCGCGAAGAAAACCGTGGCTCGGGTGGCTACAGCGCCAACGGCTACGGCGGCAACAAGCGCTCGGACGTGGGCTACGGCACGGGCGGCTACGGCGGCGGCCGTTACTGA
PROTEIN sequence
Length: 237
MHQISQTAISMGQYVVSPATHPTDCGRFRVSFSVQRSQGNGSYCRVFRFDKAFASREAARLFAVTQGWLQASMQPARVLTHDLDTPDPLPPSPLLRTPDPHIHTPTVRHPLRAITQKGSSMSSKIYVGNLPYSVTDSSLESNFAEFGQVSSAKVMMDRDTGRSKGFGFVEMASAEFAQAAINALNGMSVDGRAIVVNLARPREENRGSGGYSANGYGGNKRSDVGYGTGGYGGGRY*